Query= MSMg01no316_n19.b1 MSMg01no316_n19.b1 CHROMAT_FILE:
MSMg01no316_n19.b1 PHD_FILE: MSMg01no316_n19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:44 2005
(594 letters)
>mm_chr17_11479900_11480893
Length = 994
Score = 1112 bits (575), Expect = 0.0
Identities = 590/595 (99%), Gaps = 2/595 (0%)
Strand = Plus / Minus
Query: 1 acttcatcatggactctttgtatagaaagttctgtgactagtactttcagacttggtatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 794 acttcatcatggactctttgtatagaaagttctgtgactagtactttcagacttggtatg 735
Query: 61 gcttccagtggccatgattccaaattctctccaagaccctcaattctgagatgcatagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 734 gcttccagtggccatgattccaaattctctccaagaccctcaattctgagatgcatagga 675
Query: 121 ccttataggcagtcagaggtgaggtccacagctcagctcagtgatgcaaggcagggatct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 ccttataggcagtcagaggtgaggtccacagctcagctcagtgatgcaaggcagggatct 615
Query: 181 tctcttgttcatacattgtttcaggcctcaagtatcacaatgtatggtcatcagatggaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 614 tctcttgttcatacattgtttcaggcctcaagtatcacaatgtatggtcatcagatggaa 555
Query: 241 gtcccagtctgaggaaacttgagaaaagcctttaatgccccagatgaaacaagcacgcac 300
|||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct: 554 gtcccagtctgaggaaacttgagaaaagccttcaatgccccagatgaaacaagcaggcac 495
Query: 301 atggatcggaggaaggagggtctggatgtgg-agataacaggacatacagactcctttgg 359
||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||
Sbjct: 494 atggatcggaggaaggagggtctggatgtggca-ataacaggacatacagactcctttgg 436
Query: 360 ctgtcagtggtatcaagctatctttcagttgcattttctggaatgcttgagtttgaagta 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 ctgtcagtggtatcaagctatctttcagttgcattttctggaatgcttgagtttgaagta 376
Query: 420 tcctgggtgcccaagaattctggttaatccagatagctgagaagctaaaggatggcatat 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcctgggtgcccaagaattctggttaatccagatagctgagaagctaaaggatggcatat 316
Query: 480 gccttctctccataatggccttcattcggctcttgttctcctgactcccaaattaattct 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 gccttctctccataatggccttcattcggctcttgttctcctgactcccaaattaattct 256
Query: 540 ttcatcttcttcccagaagcctggttttagatttcgaaagtagctgccaaggcct 594
|||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 255 ttcatcttcttcccagaagcctggttttagatttcggaagtagctgccaaggcct 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 594
Length of database: 994
Length adjustment: 10
Effective length of query: 584
Effective length of database: 984
Effective search space: 574656
Effective search space used: 574656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no316_n19.g1 MSMg01no316_n19.g1 CHROMAT_FILE:
MSMg01no316_n19.g1 PHD_FILE: MSMg01no316_n19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:58:44 2005
(670 letters)
>mm_chr17_11300804_11301873
Length = 1070
Score = 1280 bits (662), Expect = 0.0
Identities = 668/670 (99%)
Strand = Plus / Plus
Query: 1 tgaaatgggaggaacagatggtgttgagcttagtgaggaagggaaaggcttctactgccg 60
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct: 201 tgaaatgggaggaacagatggtgttgagcttagtgaggaagggaaaggcttccagtgccg 260
Query: 61 ctgacaggcgttaactcagtgttgagaagggcagccctgactggcatactgagaaaagag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgacaggcgttaactcagtgttgagaagggcagccctgactggcatactgagaaaagag 320
Query: 121 gaagtgagaaagtctgatctagcagctactgggaccagatggaatttagtctggaagaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaagtgagaaagtctgatctagcagctactgggaccagatggaatttagtctggaagaga 380
Query: 181 tcaccatgatatatccttttcaaacacccagggatacatgaggaagatacacaaattctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcaccatgatatatccttttcaaacacccagggatacatgaggaagatacacaaattctg 440
Query: 241 gtatggaattacactgttttgggggacagaaactgagtaaacactcgttaagttgttata 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtatggaattacactgttttgggggacagaaactgagtaaacactcgttaagttgttata 500
Query: 301 tttctgttacctgggagagaccaccaatgaaggtcagatgcatgagctagtgagagtcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tttctgttacctgggagagaccaccaatgaaggtcagatgcatgagctagtgagagtcct 560
Query: 361 gcttttactttgtcaggagggaggggacagcagtaaagtgaatggggaaggggcttgact 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gcttttactttgtcaggagggaggggacagcagtaaagtgaatggggaaggggcttgact 620
Query: 421 gtattcagtctccctgtggatcagcagagtatggcaccgacaagggcccagagagccatt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gtattcagtctccctgtggatcagcagagtatggcaccgacaagggcccagagagccatt 680
Query: 481 tgcctgttagcagggcacccatacctggaatattgagaatgatcccagatattggcttaa 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgcctgttagcagggcacccatacctggaatattgagaatgatcccagatattggcttaa 740
Query: 541 gacttattggtttaaaaaagcagcaaactatacattctagtttccttccgtagaaatgaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 gacttattggtttaaaaaagcagcaaactatacattctagtttccttccgtagaaatgaa 800
Query: 601 tctgtgtagttctggtgccttggtgcccagaatgttgtgtgcaccgaatcagttgatgtc 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 tctgtgtagttctggtgccttggtgcccagaatgttgtgtgcaccgaatcagttgatgtc 860
Query: 661 ttactctgag 670
||||||||||
Sbjct: 861 ttactctgag 870
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 670
Length of database: 1070
Length adjustment: 10
Effective length of query: 660
Effective length of database: 1060
Effective search space: 699600
Effective search space used: 699600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
