Query= MSMg01no318_i09.b1 MSMg01no318_i09.b1 CHROMAT_FILE:
MSMg01no318_i09.b1 PHD_FILE: MSMg01no318_i09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:43 2005
(340 letters)
>mm_chr17_87253108_87253847
Length = 740
Score = 571 bits (295), Expect = e-167
Identities = 330/345 (95%), Gaps = 6/345 (1%)
Strand = Plus / Minus
Query: 1 ttccacatcgagcagtttacccaccgagccatttcctcagccatgaggtgttaacactcc 60
|||||||||||||||||||||||| ||||||| ||||||||||||||| |||||||||||
Sbjct: 352 ttccacatcgagcagtttacccactgagccatctcctcagccatgaggcgttaacactcc 293
Query: 61 gcagcatacattcaaccttgctcttcctcactgatctcttggacactcgctgctggagtt 120
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 292 gcagcatacattcaaccttgctcttcctcactgatctcttggacacttgctgctggagtt 233
Query: 121 ccacaaaaacttcagatcagatttttcagagt------acacacacacacacacacacac 174
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 232 ccacaaaaacttcagatcagatttttcagagtacacacacacacacacacacacacacac 173
Query: 175 acacacacacacgaataaaactgtacttaatgcctggatttgaggataactgacatttta 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 acacacacacacgaataaaactgtacttaatgcctggatttgaggataactgacatttta 113
Query: 235 agctataatagcaaatgattatggtgcagctctttattttggtattctgtttttcttaat 294
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct: 112 agctataatagcaaatgaatatggtgtagctctttattttggtattctgtttttcttaat 53
Query: 295 atttttgaagctctttacttagttttcttgtatagtctctaattg 339
|||||||||||||||| |||||||||||| |||||||| ||||||
Sbjct: 52 atttttgaagctctttccttagttttcttatatagtctttaattg 8
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 10
Number of successful extensions: 10
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 340
Length of database: 740
Length adjustment: 9
Effective length of query: 331
Effective length of database: 731
Effective search space: 241961
Effective search space used: 241961
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_i09.g1 MSMg01no318_i09.g1 CHROMAT_FILE:
MSMg01no318_i09.g1 PHD_FILE: MSMg01no318_i09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:00:43 2005
(249 letters)
>mm_chr17_87086271_87086922
Length = 652
Score = 418 bits (216), Expect = e-121
Identities = 241/252 (95%), Gaps = 7/252 (2%)
Strand = Plus / Plus
Query: 1 caatccaagaaagaaagaaaaaaaaagccacgagaatgacagagaga---ttgcccaata 57
|||||||||||||| |||||||| ||||||||||||||||||||| ||||||||||
Sbjct: 205 caatccaagaaaga--gaaaaaaa--gccacgagaatgacagagagaagattgcccaata 260
Query: 58 caagagccatgtgccaagtacagaggtcaaagagagagaactggacaaggacaggagagt 117
||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||
Sbjct: 261 caagagccatgtgccaagtacagaggtcaaagagagagacctggacaaggtcaggagagt 320
Query: 118 cagaaggcaggtccctgcagagactctgtggagggaaaacctgatggacccgaacacatg 177
| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 321 ctgaaggcaggtccctgcagagactccgtggagggaaaacctgatggacccgaacacatg 380
Query: 178 gagaagagacttacacagcccaggctggggtctgaagctgaatcagtgtcaagtcttctg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gagaagagacttacacagcccaggctggggtctgaagctgaatcagtgtcaagtcttctg 440
Query: 238 taaagctgagag 249
||||||||||||
Sbjct: 441 taaagctgagag 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 652
Length adjustment: 9
Effective length of query: 240
Effective length of database: 643
Effective search space: 154320
Effective search space used: 154320
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
