Query= MSMg01no318_o09.b1 MSMg01no318_o09.b1 CHROMAT_FILE:
MSMg01no318_o09.b1 PHD_FILE: MSMg01no318_o09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:09 2005
(372 letters)
>mm_chr17_32074429_32075200
Length = 772
Score = 650 bits (336), Expect = 0.0
Identities = 360/368 (97%), Gaps = 1/368 (0%)
Strand = Plus / Plus
Query: 5 gaattccaatctactcacgccaatgcacacgtgtcctttcacaggataaatcctctacat 64
|||||||||||||| || | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaatctacacatgtcaatgcacacgtgtcctttcacaggataaatcctctacat 264
Query: 65 cggatggaagggtgggttccacggatgatggagtccgaaaaattcaatctccacaagctg 124
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cggatggaagggtgggttccatggatgatggagtccgaaaaattcaatctccacaagctg 324
Query: 125 tctgtcttcccagaacacaaaatctatctgacactatagaagggagagagaggctgggga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tctgtcttcccagaacacaaaatctatctgacactatagaagggagagagaggctgggga 384
Query: 185 gacggctctgtggttaaagcatttgccaccaagtgcgagggcctgagctggagtccctcg 244
||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 385 gacggctctgtgggtaaagcatttgccaccaagtgtgagggcctgagctggagtccctcg 444
Query: 245 accaacaaaaagttgggcatagtaggctgcatctaata-ctcccaatactttcatggagg 303
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 445 accaacaaaaagttgggcatagtaggctgcatctaataactcccaatactttcatggagg 504
Query: 304 gatgggaggcagaaacgggacaatccccagatgcctgcaggctagggagcctggtgtaca 363
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gatgggaggcagaaatgggacaatccccagatgcctgcaggctagggagcctggtgtaca 564
Query: 364 tagtacag 371
||||||||
Sbjct: 565 tagtacag 572
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 372
Length of database: 772
Length adjustment: 9
Effective length of query: 363
Effective length of database: 763
Effective search space: 276969
Effective search space used: 276969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no318_o09.g1 MSMg01no318_o09.g1 CHROMAT_FILE:
MSMg01no318_o09.g1 PHD_FILE: MSMg01no318_o09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:09 2005
(338 letters)
>mm_chr17_32237159_32237902
Length = 744
Score = 464 bits (240), Expect = e-135
Identities = 314/342 (91%), Gaps = 8/342 (2%)
Strand = Plus / Minus
Query: 4 cacggaggccacgaggctggaggagtccaccggatctctgagggtcttatagcactggag 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 544 cacggaggccacgaggctggaggagtccaccggatctctgagggtcttatagcactggag 485
Query: 64 ctgggtgggagcttttagatagcagcatttaggaatgccgcccatagg------agcacc 117
|||||||||||||||||||||||||||||||||| |||||||||| || ||||||
Sbjct: 484 ctgggtgggagcttttagatagcagcatttaggagtgccgcccatgggatgatcagcacc 425
Query: 118 gtaggccaacatgttggaacagcgcggaatgaattaaccacatggaggagcatatcccag 177
||||| |||| ||||| |||||| ||||||||||| ||||| |||||||| ||||||||
Sbjct: 424 gtaggtcaacgggttgggacagcgtggaatgaattagccacacggaggagcgtatcccag 365
Query: 178 atgagatggcttggtgctaacccgggtgtgcagagagcatgggcaccatgtacttcacca 237
||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||
Sbjct: 364 atgagatggcttggtgctaacccgggtgtgcagagagcatgggtgccatgtgcttcacca 305
Query: 238 gctcagatgagc-ggttaggggtttgtaccacagagctggtttcccggaggggcgtggcc 296
||| |||||||| || ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 304 gctaagatgagctgg-taggggtttgtaccacagagctggtttcccggaggggcgtgacc 246
Query: 297 cgagcgaggccctgccgccagctcaccccttgcggagcggga 338
|||||||||||| ||| ||||||| | |||||| ||||||||
Sbjct: 245 cgagcgaggccccgcctccagctcgcaccttgcagagcggga 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 744
Length adjustment: 9
Effective length of query: 329
Effective length of database: 735
Effective search space: 241815
Effective search space used: 241815
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
