Query= MSMg01no318_p21.b1 MSMg01no318_p21.b1 CHROMAT_FILE:
MSMg01no318_p21.b1 PHD_FILE: MSMg01no318_p21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:16 2005
(240 letters)
>mm_chr17_46766977_46767616
Length = 640
Score = 435 bits (225), Expect = e-126
Identities = 234/237 (98%)
Strand = Plus / Minus
Query: 1 atgaggcacacaagaagaaggtgctgtggacggggttgtcagggacatgtggtggccatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 437 atgaggcacacaagaagaaggtgctgtggacggggttgtcagggacatgtggtggccatg 378
Query: 61 tggcaggaccctggagtcctggcgccacttctcctgcctgtgaggccctctgtggcttcc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 377 tggcaggaccctggagtcctggcgccacttctcctgcctgtgaggccctctgtggcttcc 318
Query: 121 ttcccccctcccagctgcttgggggaagggaggtctaagcaggcctggggggccctccag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 ttcccccctcccagctgcttgggggaagggaggtctaagcaggcctggggggccctccag 258
Query: 181 agccagaagggggacaagtttctatccatcctctcttgcatatcctggaggcctgtc 237
|||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 257 agccagaagggggacaaggcgctatccatcctctcttgcatatcctggaggcctgtc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 240
Length of database: 640
Length adjustment: 9
Effective length of query: 231
Effective length of database: 631
Effective search space: 145761
Effective search space used: 145761
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no318_p21.g1 MSMg01no318_p21.g1 CHROMAT_FILE:
MSMg01no318_p21.g1 PHD_FILE: MSMg01no318_p21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:01:16 2005
(290 letters)
>mm_chr17_46574773_46575461
Length = 689
Score = 509 bits (263), Expect = e-148
Identities = 283/293 (96%), Gaps = 7/293 (2%)
Strand = Plus / Plus
Query: 1 tgagcggtcgtactcccagccctgggagcagggcactgtgaggggctcaccctcaggctc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgagcggtcgtactcccagccctgggagcagggcactgtgaggggctcaccctcaggctc 260
Query: 61 cccagagttgtacacctctgtccccaaggtgacattgggaagagcctggggataggcaaa 120
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cccagagttgtacacctctgttcccaaggtgacattgggaagagcctggggataggcaaa 320
Query: 121 gtggaggcaggaactaaagctgccgtcagtctcccggggtagatgggttttcagccacaa 180
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcggaggcaggaactaaagctgccgtcagtctcccggggtagatgggttttcagccacaa 380
Query: 181 gtcctggtgactgaggttggctggggcatcaggcagggcacaatgatgggtaggcacagc 240
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 381 gtcctggtgactgaggttggctggggcatcaggcagggcacaatgatgggcaggcacagc 440
Query: 241 agccatgaagatgtttt---aggagaaaatgcatcgggagcaggaatcggggc 290
||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 441 agccatgaagatg----ggcaggagaaaatgcatcgggagcaggaatcggggc 489
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 689
Length adjustment: 9
Effective length of query: 281
Effective length of database: 680
Effective search space: 191080
Effective search space used: 191080
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
