TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCCAGGAATTTGCAGGGAACACCTACTGTGTCATGTAGGTGAATTAT
GAACATCAGAGTTCAGACCTCACCTTGACTGGAGACCAGTCTACAATTCC
TCATACAGACAACTGGGCACCTTCCCTGCCAGAGGAGAGGTGTTCTCCTG
GGAGGGCTCTGACTGGCAGAGCAGGAGACGGAGCCATCCTTTGTCCTGGG
TCACACGGAGACCAGTCTGCCCAGGGGAGAGTGTGGACTACAAAAGCTAC
AGCTTCTGGGACAAGCAGAAGCTACACAGCTTCTGGGACAGGCCCGTTCC
CTGCTAGAGGAAAGCTTGCCTGCAGAGGGAGTACTCTGACCACTGAGACT
CAGGACAGAGAGCTGCCCCCCCATAACTGCTGACAGAGGCTAACAAATCA
CAGGAGGAACAAGATCCAGCCAGAGACAAATATAACAACTAACACCAGAG
ATAACCAGATGGCTAAAGGAAAACTTAAGAATCTTACTAACAGAAACCAA
GATAGCTCACCCTCATCAGAATCCAGCACTTTCACCTCACTCAGTCTAAC
ACAACCGGAAAACAAGAATCAGAATCGAAATCTTATCTCATGATGCTGGN
AGAGGACTTTAATTAATTTAATTAATAACTTCACTTTAAAGAAATACAGC
AAAACACTGCTTAAACGGGTAGAAT

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCAACAGGAAGAGAGGGAAACATTGTAT
TTCTTTTGAGCATTTGAAATATCAAAATTCATCTTCAATGAAACTTTTGT
GTTCCTATATGTTGAAATGCTCACATCTTGCTCTGATAGATTTGCAGAGC
TTTGGTGGAGAAATACTTTCTTGGCAGAAGTATTTAATGCTGGCACCTAA
GCTACTTCAATTGAATAGACTGTAATTCCAGGTGCATCTAGGATGTCTAG
GTAGAGTTATTTAGAATTAGTAAGTGTTATTTGTCTTGGTTTATTTTTCT
TCTTTGTTTTTTTATTAATATTTCTTTATTTACATATCAAATGCTATCCC
CTTTCCTAGTTTCCCTTCCAAAAGCCCCCTATCCCCCCTTTCCCTGCTCC
CCAACCCACCCACTCCCACTCCTTGAATTCCACTAACTGGGGCATAGAAC
CTTCATAGGACCTAGGGCCTCTACTCCCATTGATGACCAACTAGGCCATC
CTCAGCTACATATACAGCTAGAGCCACATGTCCCACCATGTGTTTTCTTT
AATTTATGGTTTAGTTCCAAGGAGCTCTGGGTGTACTGATTAGTTCATAT
TGATGTTCCTCCTATGGTGCTTCAGACCCCTTCATCTCTTTGGGTACTTT
CTCTAGCTCCTTCATT

Query= MSMg01no319_n15.g1 MSMg01no319_n15.g1 CHROMAT_FILE:
MSMg01no319_n15.g1 PHD_FILE: MSMg01no319_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:02:15 2005
         (643 letters)



>mm_chr17_39806649_39807692
          Length = 1044

 Score = 1064 bits (550), Expect = 0.0
 Identities = 624/650 (96%), Gaps = 9/650 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   caacaggaagagagggaaacattgtatttct-tttgagca-tttgaaatatcaaaattca 58
           ||||||||||||||||||||||||||||||| ||| | || |||||||| | ||||||||
Sbjct: 201 caacaggaagagagggaaacattgtatttctcttt-a-caatttgaaatcttaaaattca 258

                                                                       
Query: 59  tcttcaatgaaacttttgtgttcctatatgttgaaatgctcacatcttgctctgatagat 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 tcttcaatgaaacttttgtgttcctatatgttgaaatgctcacatcttgctctgatagat 318

                                                                       
Query: 119 ttgcagagctttggtggagaaatactttcttggcagaagtattta-atgctggcacctaa 177
           |||||||| ||||||||||||||||||| |||||||||||||||  ||||||||||||||
Sbjct: 319 ttgcagagatttggtggagaaatacttttttggcagaagtatttttatgctggcacctaa 378

                                                                       
Query: 178 gctacttcaattgaatagactgtaattccaggtgcatctaggatgtctaggtagagttat 237
           || ||||||| ||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 379 gccacttcaactgaatagactgtaattccaggtgcagctaggatgtctaggtagagttat 438

                                                                       
Query: 238 ttagaattagtaagtgttatttgtcttggtttatttttcttctttgttttttt---atta 294
           |||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||
Sbjct: 439 ttagaattagtaagtgttatttgtcttggtttatttttcttctttgtttttttttaatta 498

                                                                       
Query: 295 atatttctttatttacatatcaaatgctatcccctttcctagtttcccttccaaaagccc 354
           |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 499 atatttctttatttacttttcaaatgctatcccctttcctagtttcccttccaaaagccc 558

                                                                       
Query: 355 cctat-cccccctttccctgctccccaacccacccactcccactccttgaattccactaa 413
           ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cctattcccccctttccctgctccccaacccacccactcccactccttgaattccactaa 618

                                                                       
Query: 414 ctggggcatagaaccttcataggacctagggcctctactcccattgatgaccaactaggc 473
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 619 ctggggcatagaaccttcataggacctagggcctctactcccattgatgtccaactaggc 678

                                                                       
Query: 474 catcctcagctacatatacagctagagccacatgtcccaccatgtgttttctttaattta 533
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  
Sbjct: 679 catcctcagctacatatacagctagagccacatgtcccaccatgtgttttctttgattgg 738

                                                                       
Query: 534 tggtttagttccaaggagctctgggtgtactgattagttcatattgatgttcctcctatg 593
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 tggtttagttccaaggagctctgggtgtactgattagttcatattgatgttcctcctatg 798

                                                             
Query: 594 gtgcttcagaccccttcatctctttgggtactttctctagctccttcatt 643
           | |||||||||||||||| |||||||||||||||||||| ||||||||||
Sbjct: 799 gggcttcagaccccttcagctctttgggtactttctctaactccttcatt 848


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 5
Number of successful extensions: 5
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 643
Length of database: 1044
Length adjustment: 10
Effective length of query: 633
Effective length of database: 1034
Effective search space:   654522
Effective search space used:   654522
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)