CTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGGATCCGCG
GAATTCACAACGGACAGCACTAAGTGCCCTTAAACTAATGAATGAAAAGA
AAAAGTTGACACAAGTATATAATGTAATATACTTAGCCATAAAAACCAAT
GAAACCCTGTCATTTACAATTACATGAGCAGAACTAGAGATCATTATGTT
AAGCAAAATAAATCAGAAAAGTACCTCAATGAAGTGACTCCTATGAAATG
TAAAAAAGCTAATTTCATATAAGTTTAGAGCAGAATGACAGTTACAGAGA
CCAGGGTCAAGGAAGAGGGAAATGTGGAATGGTTTATCAATGGACACTAC
AAATACAGCAGCAAGTAGCTCTGGGGTAACTACTATACACTACACATAAC
AACATATATTAACATGTCAAAAGGCCAGCACAAAGGACTTCAAAGTTTTT
TCCACAAAGACATGATGAGTGAGGAGATAAATGCACTTGACATGATGTAA
ACATTATGCAAAAGTATTACTTAATATATAGATCTATATTACTCAATATA
CAGATGTATTAAATATGAATAACAATGAGTAATGCTTCTAGCTTTTGTTC
ATGTTACAATTATTTTTAATAATAATTTTTATAGCTAAAGAAATGGCAAA
GTCCATAAAGAGTAGAGTTTGGATCCCCAGTAAACATCAAAAGGTATGAT
GGCCACTTGAAACTTCAGTGCTCANAAGCCTGAGAGGGGAC

ACGATGATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGATTTGATTCAAATAATTTTAGG
AAAAAAATTTGAGGAGATAGTTTTAGTTGTTTTGCCAGAAAGATGTAATA
AAGTTAGAATCCAGAAGAGAATATGTCCCCTCCTTAGAATAGTAAGCAAA
GGTTGCATACTTTTGGGATACGATGACCCTTCATAATTACACAAAGAAGA
GAAATTGTCTTGGGATAAATTTGTAATCAAGAAAAAAACAGTCATTCTAG
GTCAGGTCCAAGGATGAGGCACAGGTGTGCACTATGATAAAGCCAGGCCA
TGGGAAACTGATTCTTTGGACTTAAAATGAGCTTACAGAATAAAGCACTG
CTTTGAACTTGCTATCAATGTCCTTCCACAACTCCTCCTTTGTGTGACAT
TTTATCTGAGATAATTGTCTAAAGAGCTTTTGTCTAAGAAGGTATAAAAA
GGCCAGAACAAATAAGGTGGCAGCTTGGGGGGCTCTGCCCGGTCCATCCA
AATGTATATATGTGTATGTCTGTTTGTCTATGTGTATGTATGTACACACA
TGTGTAGTTATATGTGTTATATATGTGTACGCATATACCCCCTGTGGAAC
CACTTGTGCTCCGCTCGTTCGTTTCTTCCCCACTTGCGTCATCTTTTTAC
TCTTTCCTCGGTTCTTGTCCCCCCTTTTCTTTGAT

Query= MSMg01no328_p22.b1 MSMg01no328_p22.b1 CHROMAT_FILE:
MSMg01no328_p22.b1 PHD_FILE: MSMg01no328_p22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:14:18 2005
         (674 letters)



>mm_chr17_74981920_74982993
          Length = 1074

 Score = 1247 bits (645), Expect = 0.0
 Identities = 663/669 (99%)
 Strand = Plus / Minus

                                                                        
Query: 6    gaattcacaacggacagcactaagtgcccttaaactaatgaatgaaaagaaaaagttgac 65
            ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1044 gaattcacaacggacagcattaagtgcccttaaactaatgaatgaaaagaaaaagttgac 985

                                                                        
Query: 66   acaagtatataatgtaatatacttagccataaaaaccaatgaaaccctgtcatttacaat 125
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 984  acaagtatataatgtaatatacttagccataaaaaccaatgaaaccctgtcatttacaat 925

                                                                        
Query: 126  tacatgagcagaactagagatcattatgttaagcaaaataaatcagaaaagtacctcaat 185
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 924  tacatgagcagaactagagatcattatgttaagcaaaataaatcagaaaagtacctcaat 865

                                                                        
Query: 186  gaagtgactcctatgaaatgtaaaaaagctaatttcatataagtttagagcagaatgaca 245
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 864  gaagtgactcctatgaaatgtaaaaaagctaatttcatataagtttagagcagaatgaca 805

                                                                        
Query: 246  gttacagagaccagggtcaaggaagagggaaatgtggaatggtttatcaatggacactac 305
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804  gttacagagaccagggtcaaggaagagggaaatgtggaatggtttatcaatggacactac 745

                                                                        
Query: 306  aaatacagcagcaagtagctctggggtaactactatacactacacataacaacatatatt 365
             |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744  caatacagcagcaagtagctctggggtaactactatacactacacataacaacatatatt 685

                                                                        
Query: 366  aacatgtcaaaaggccagcacaaaggacttcaaagttttttccacaaagacatgatgagt 425
            |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 684  aacatgtcaaaaggccagtagaaaggacttcaaagttttttccacaaagacatgatgagt 625

                                                                        
Query: 426  gaggagataaatgcacttgacatgatgtaaacattatgcaaaagtattacttaatatata 485
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624  gaggagataaatgcacttgacatgatgtaaacattatgcaaaagtattacttaatatata 565

                                                                        
Query: 486  gatctatattactcaatatacagatgtattaaatatgaataacaatgagtaatgcttcta 545
            |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||
Sbjct: 564  gatctatattactcaatatacagatgtattaaatatgagtaacaatgaataatgcttcta 505

                                                                        
Query: 546  gcttttgttcatgttacaattatttttaataataatttttatagctaaagaaatggcaaa 605
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504  gcttttgttcatgttacaattatttttaataataatttttatagctaaagaaatggcaaa 445

                                                                        
Query: 606  gtccataaagagtagagtttggatccccagtaaacatcaaaaggtatgatggccacttga 665
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444  gtccataaagagtagagtttggatccccagtaaacatcaaaaggtatgatggccacttga 385

                     
Query: 666  aacttcagt 674
            |||||||||
Sbjct: 384  aacttcagt 376


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space:   706496
Effective search space used:   706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)