Query= MSMg01no329_l16.b1 MSMg01no329_l16.b1 CHROMAT_FILE:
MSMg01no329_l16.b1 PHD_FILE: MSMg01no329_l16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:17 2005
(370 letters)
>mm_chr17_45501313_45502082
Length = 770
Score = 600 bits (310), Expect = e-176
Identities = 316/318 (99%)
Strand = Plus / Minus
Query: 51 gtcaacctttgctctgttgtgttaagaaacagctcaagacaactaaatggctgggccact 110
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 gtcaacctttgctctgttgtgttaagaaacagctcaagacaactaaatggctgggccact 710
Query: 111 gcgtgctctttctggatgcctgcctgaggaagctctcatctctcatctgggacatactgt 170
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 709 gcgtgctctttctggatgcctgcctgaggaagctctcatctctcatctgggacatactgt 650
Query: 171 tcccaaaaagcagaggggaagagagtgattgtggacacataccgggctctcagtctctgc 230
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 tcccaaaaagcagaggggaagagagtgattgtggacacataccgggctctcagtctctgc 590
Query: 231 tcagatgtgacacacgtgactacccatcactgcatccagatacccaaagcggctcacagg 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 tcagatgtgacacacgtgactacccatcactgcatccagatacccaaagcggctcacagg 530
Query: 291 atgaaggcagtgtgggagcagtaaggttcttaccaacagctctaccacaagcaccccacg 350
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 529 atgaaggcagtgtgggagcagtaacgttcttaccaacagctctaccacaagcaccccaca 470
Query: 351 gcgtgcatgctgtccatg 368
||||||||||||||||||
Sbjct: 469 gcgtgcatgctgtccatg 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 370
Length of database: 770
Length adjustment: 9
Effective length of query: 361
Effective length of database: 761
Effective search space: 274721
Effective search space used: 274721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no329_l16.g1 MSMg01no329_l16.g1 CHROMAT_FILE:
MSMg01no329_l16.g1 PHD_FILE: MSMg01no329_l16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:15:17 2005
(264 letters)
>mm_chr17_45332811_45333475
Length = 665
Score = 478 bits (247), Expect = e-139
Identities = 259/263 (98%), Gaps = 3/263 (1%)
Strand = Plus / Plus
Query: 1 cagacctgcaagagcagtcagtgctagtaaccgctaagccttctcaccagtcctggtttc 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 cagacctgcaagagcagtcagtgctagtaaccgctaagccttctcaccagccctggtttc 260
Query: 61 tattttaaacatgctgttcttactctctactctgagatgccattgcagactggcaccctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tattttaaacatgctgttcttactctctactctgagatgccattgcagactggcaccctt 320
Query: 121 ccccgcccatctcttcccctccctcagagataagaggtgaagaatcccaggttttcctgg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccccgcccatctcttcccctccctcagagataagaggtgaagaatcccaggttttcctgg 380
Query: 181 taaagatttcacttctatcgtttaaaaactttaaaaaatgt-gggngg-ggggaggcatg 238
||||||||||||||||||||||||||||||||||||||||| ||| || |||||||||||
Sbjct: 381 taaagatttcacttctatcgtttaaaaactttaaaaaatgttggg-ggtggggaggcatg 439
Query: 239 aattttgaaggagagtggggagg 261
|||||||||||||||||||||||
Sbjct: 440 aattttgaaggagagtggggagg 462
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 264
Length of database: 665
Length adjustment: 9
Effective length of query: 255
Effective length of database: 656
Effective search space: 167280
Effective search space used: 167280
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
