Query= MSMg01no335_c10.b1 MSMg01no335_c10.b1 CHROMAT_FILE:
MSMg01no335_c10.b1 PHD_FILE: MSMg01no335_c10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:49 2005
(614 letters)
>mm_chr17_64852526_64853539
Length = 1014
Score = 1141 bits (590), Expect = 0.0
Identities = 608/614 (99%)
Strand = Plus / Plus
Query: 1 atacattagccatatggctacgagaggtatttttagggcaatcctggaagtttccccatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 atacattagccatatggctacgagaggtatttttagggcaatcctggaagtttccccatc 260
Query: 61 actgaaacttgagctgaggattggaaatcgtaaccttttctttagaggcagagagcccac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 261 actgaaacttgagctgaggattggaaatcgtaaccttttctttagaggcagagagcctac 320
Query: 121 tctgttgtcctttccttcttactgatttcctctctaaatcctatggtcatagttaacagt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctgttgtcctttccttcttactgatttcctctctaaatcctatggtcatagttaacagt 380
Query: 181 cttgtcaaggcttttctataatgaacccttcactccgggaagctacaggtaattatctgg 240
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 381 cttgtcaaggcttttctataatgaacccttcactccaggaagctacaggtaattatctgg 440
Query: 241 atcccgtgccccagaatacagggatcccatttttcaccggtcttaattgctgctcagtct 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 atcccgtgccccagaatacaggcatcccatttttcaccggtcttaattgctgctcagtct 500
Query: 301 aaccaaatcagctaactgaatctcagagttgtatcttggggttgctatagcttttaatca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaccaaatcagctaactgaatctcagagttgtatcttggggttgctatagcttttaatca 560
Query: 361 cctctggaaacggactctgataaagtcaagagttctgcctagaaagggcttgcctttcta 420
||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 cctctggaaccagactctgataaagtcaagagttctgcctagaaagggcttgcctttcta 620
Query: 421 ggttgaaccaggaaaggctgattaaatacaaagggaattaaacttggaaaatctctgggc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttgaaccaggaaaggctgattaaatacaaagggaattaaacttggaaaatctctgggc 680
Query: 481 tgcctagaatcaagggagaaacattaccagctttgagtacatttggaaatccaggaacct 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 cgcctagaatcaagggagaaacattaccagctttgagtacatttggaaatccaggaacct 740
Query: 541 cagcaatttactggtaagttcttgaggaagtaaaataagcatttcacaggagttcaccca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 cagcaatttactggtaagttcttgaggaagtaaaataagcatttcacaggagttcaccca 800
Query: 601 caaagagcataaaa 614
||||||||||||||
Sbjct: 801 caaagagcataaaa 814
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 614
Length of database: 1014
Length adjustment: 10
Effective length of query: 604
Effective length of database: 1004
Effective search space: 606416
Effective search space used: 606416
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_c10.g1 MSMg01no335_c10.g1 CHROMAT_FILE:
MSMg01no335_c10.g1 PHD_FILE: MSMg01no335_c10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:49 2005
(589 letters)
>mm_chr17_65026011_65026999
Length = 989
Score = 1087 bits (562), Expect = 0.0
Identities = 584/596 (97%), Gaps = 8/596 (1%)
Strand = Plus / Minus
Query: 1 tctttctccacggtaaagagcctgaactacagactgagttccaggacagccatagctata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 889 tctttctccacggtaaagagcctgaactacagactgagttccaggacagccatagctata 830
Query: 61 cggagaaatcctgtctcaatggaaggtggggtt--------gacagacagacagacagaa 112
||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 829 cggagaaatcctgtctcaatggaaggtggggttgacagacagacagacagacagacagaa 770
Query: 113 aaaaaggcaagcatttaggctactgttgagagcagttctcagactcagcccaggagggag 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aaaaaggcaagcatttaggctactgttgagagcagttctcagactcagcccaggagggag 710
Query: 173 aggaagaagctggaagggtctggcttccctctagcactgtggagttgacacactgcctgg 232
|||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 709 aggaagaagctggaagggcctggcttccctccagcactgtggagttgacacactgcctgg 650
Query: 233 gtgatctacagactttataatatgacatgagaataaacagggcaggattaatgctgtttg 292
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 gtgatctacagactttaaaatatgacatgagaataaacagggcaggattaatgctgtttg 590
Query: 293 gagttgctcttggcagccaccgatccctcactcacacaactgttcaaagggacatgcctg 352
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 589 gagttgctcttggcagccaccgatccctcactcacacaactgttcaaagggacatgcctg 530
Query: 353 ccaacatccgaatgagtggcagtcaacagcagagtgggagagcgcaccagcagcagcagc 412
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 529 ccaacatccgaatgagcggcagtcaacagcagagtgggagagcgcaccagcagcagcagc 470
Query: 413 ctctttgtctctgactctctgacgcgtgttttgaaatttccttcttaaaagtgtctgtgc 472
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 ctctttgtctctgactctctgacgcgtgttttgaaatttccttcttaaaagtgtctgtgc 410
Query: 473 taatgacttgataattgtttacgacttttctgttgaagtgtgaagtactggcagagtaaa 532
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 409 taatgacttgataattgtttacgacttttctgttgaagtgtgaagtactggcagagtaaa 350
Query: 533 tttacaaatgtcaagtacaatttgaaaattactatgtctttctgccacctctaaca 588
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 349 tttacaaatgtcaagtacaatttgaaaattactatgtctttctgccacctctaaca 294
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 589
Length of database: 989
Length adjustment: 10
Effective length of query: 579
Effective length of database: 979
Effective search space: 566841
Effective search space used: 566841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
