Query= MSMg01no335_d01.b1 MSMg01no335_d01.b1 CHROMAT_FILE:
MSMg01no335_d01.b1 PHD_FILE: MSMg01no335_d01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:52 2005
(455 letters)
>mm_chr17_31451562_31452416
Length = 855
Score = 824 bits (426), Expect = 0.0
Identities = 446/454 (98%), Gaps = 4/454 (0%)
Strand = Plus / Minus
Query: 6 aattctacagaggtacggaaaaatgagagtctcaaaacagaagagccagaggaactcagg 65
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 512 aattctacagaggaacggaaaaatgagagtctcaaaacagaagagccagaggaactcagg 453
Query: 66 ccgtgcaattttatttccaccagttcaaacacagacaagacatcccagtggcaagttaaa 125
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 452 ccgtgcaatttcatttccaccagttcaaacacagacaagacatcccagtggcaagttaaa 393
Query: 126 tcgttttgctacttagaagggtgatgataggagctggcacagggggctggaaaagcctta 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 392 tcgttttgctacttagaagggtgatgataggagctggcacagggggctggaaaagcctta 333
Query: 186 acctagatcctgggtacccaggtgtataggtaaagacctgtcaaacagtcgcttaagact 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 332 acctagatcctgggtacccaggtgtataggtaaagacctgtcaaacagtcgcttaagact 273
Query: 246 aatgcacctttctgtgtacagataattctccaatttaagaaaaaaatatatatatacatc 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 aatgcacctttctgtgtacagataattctccaatttaagaaaaaaatatatatatacatc 213
Query: 306 cacacacatccatgtacctatccatctgtctatctatgtatctatttatgtatgtatgta 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 cacacacatccatgtacctatccatctgtctatctatgtatctatttatgtatgtatgta 153
Query: 366 tgtatgcatgtatgtgtctatctatctatctatctatctatctatctatctatctatcta 425
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tgtatggatgtatgtgtctatctatctatctatctatctatctatctatctatctatcta 93
Query: 426 tctatccatctatc--t--atctatctatgctat 455
|||||| ||||||| | |||||||||||||||
Sbjct: 92 tctatctatctatccatccatctatctatgctat 59
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 94
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no335_d01.g1 MSMg01no335_d01.g1 CHROMAT_FILE:
MSMg01no335_d01.g1 PHD_FILE: MSMg01no335_d01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:22:52 2005
(418 letters)
>mm_chr17_31433973_31434790
Length = 818
Score = 770 bits (398), Expect = 0.0
Identities = 412/417 (98%)
Strand = Plus / Plus
Query: 1 tgactccttgtatttaagctcaggacaagtgaaaataacagtttctgtttatctcccaag 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 tgactccttgtatttaagctcaggacaagtgaaaataacagtttctgtttatctcccacg 260
Query: 61 gccaatggagcctttaaacacttagaaagggctcgattagaggagttagtgtttgtcttg 120
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gccaatggagcctttaaacgcttagaaagggctcgattagaggagttagtgtttgtcttg 320
Query: 121 gtttaaaacaaaactcttgaagcttttggagggagtttggttcccaggtttgccctttta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtttaaaacaaaactcttgaagcttttggagggagtttggttcccaggtttgccctttta 380
Query: 181 taaagtgccatcattttgacaggttgccttaggctgccttgatgttgcctgtgtgctaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taaagtgccatcattttgacaggttgccttaggctgccttgatgttgcctgtgtgctaaa 440
Query: 241 gactggataaccccccttggggcattgctcttgcttttgctaactcccacccactcctga 300
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gactggaaaaccccccttggggcattgctcttgcttttgctaactcccacccactcctga 500
Query: 301 gtctccttgaagggttgatgggttctgggtagctcagagccgggtagctgggaggatcgt 360
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 501 gtctccttgaagggttgatgggttctgggtagctcagagcccggtagctgggaggatcgt 560
Query: 361 gggtgtgtctgtccgtccctcaactcttgcttggctggnctctctgtgtgctcctga 417
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 gggtgtgtctgtccgtccctcaactcttgcttggctgggctctctgtgtgctcctga 617
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 418
Length of database: 818
Length adjustment: 9
Effective length of query: 409
Effective length of database: 809
Effective search space: 330881
Effective search space used: 330881
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
