Query= MSMg01no336_a06.b1 MSMg01no336_a06.b1 CHROMAT_FILE:
MSMg01no336_a06.b1 PHD_FILE: MSMg01no336_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:58 2005
(475 letters)
>mm_chr17_27493601_27494475
Length = 875
Score = 903 bits (467), Expect = 0.0
Identities = 470/471 (99%)
Strand = Plus / Plus
Query: 4 ggaattcccacaagtcacttgtgttgctgagaaagaataaaaagcatttatttagtgcct 63
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcccacaaggcacttgtgttgctgagaaagaataaaaagcatttatttagtgcct 263
Query: 64 actgtgtaccctctttccactggtggctaccaacagtttatgccctacccattacctgtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 actgtgtaccctctttccactggtggctaccaacagtttatgccctacccattacctgtt 323
Query: 124 caagggggataagccgccatgggatatacaatttgttcagagacaaccttgtcagtagct 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caagggggataagccgccatgggatatacaatttgttcagagacaaccttgtcagtagct 383
Query: 184 gggtacagaagtagtgtgtgactctggtgtcccctgctgctccagctgagccaaagcagg 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gggtacagaagtagtgtgtgactctggtgtcccctgctgctccagctgagccaaagcagg 443
Query: 244 gagataggcccagtatggtgtctatagggaggagaaacaggaccgtggttgggtgccaga 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gagataggcccagtatggtgtctatagggaggagaaacaggaccgtggttgggtgccaga 503
Query: 304 ggatatagtcatctatagtcctaatgccccccacctcccacccccgggctcactatcctg 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ggatatagtcatctatagtcctaatgccccccacctcccacccccgggctcactatcctg 563
Query: 364 gtgcactgaggcacagatgctagtcttgaaggtagagaggctatctcataggaggagagg 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gtgcactgaggcacagatgctagtcttgaaggtagagaggctatctcataggaggagagg 623
Query: 424 agacgggggagtctaggacgatcctaatcttgggtgggtggctgctcctgg 474
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 agacgggggagtctaggacgatcctaatcttgggtgggtggctgctcctgg 674
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_a06.g1 MSMg01no336_a06.g1 CHROMAT_FILE:
MSMg01no336_a06.g1 PHD_FILE: MSMg01no336_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:23:59 2005
(327 letters)
>mm_chr17_27686759_27687481
Length = 723
Score = 582 bits (301), Expect = e-171
Identities = 319/327 (97%), Gaps = 4/327 (1%)
Strand = Plus / Minus
Query: 1 agagccggtgtatttcctagactggggaccccaggccaccttgaaacctttctcagggtt 60
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 agagcccgtgtatttcctagactggggaccccaggccaccttgaaacctttctcagggtt 464
Query: 61 gagaaaacagtcctggtctctgtttggggatatgtggcctggatatgtgtgtgtgtgtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 gagaaaacagtcctggtctctgtttggggatatgtggcctggatatgtgtgtgtgtgtag 404
Query: 121 ggtgtctaccaatcaggttgtagaagcacaaaaacgtcgtgtagtcaaacaagaggcaag 180
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 403 ggtgtctaccaatcaggttgtagaagcacaaaaacgttgtgtagtcaaacaagaggcaag 344
Query: 181 tgttagggagtgagcacggtggttgtggagggagggaccagcaggtcttgcggggcgggg 240
|||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct: 343 tgttagggagtgagcacggtggttgt----ggagggaccagcaggtcttgtggggcgggg 288
Query: 241 cagtgagcacactccaggagatttattaacctcctaggcttggttttcttcatcttcaac 300
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cagtgagcacactccaggggatttattaacctcctaggcttggttttcttcatcttcaac 228
Query: 301 cccagcaagctggacaccaggcccaag 327
|||||||||||||||||||||||||||
Sbjct: 227 cccagcaagctggacaccaggcccaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 327
Length of database: 723
Length adjustment: 9
Effective length of query: 318
Effective length of database: 714
Effective search space: 227052
Effective search space used: 227052
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
