Query= MSMg01no336_e07.b1 MSMg01no336_e07.b1 CHROMAT_FILE:
MSMg01no336_e07.b1 PHD_FILE: MSMg01no336_e07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:17 2005
(511 letters)
>mm_chr17_32934058_32934968
Length = 911
Score = 919 bits (475), Expect = 0.0
Identities = 502/511 (98%)
Strand = Plus / Minus
Query: 1 gaagccctatgtgtgtaagcagtgtgcaaaagccttcatgtctttgactcagttaagacg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 711 gaagccctatgtgtgtaagcagtgtgcaaaagccttcatgtctttgactcagttaagacg 652
Query: 61 acatgaaataatccacagcggcatcaaaccctacatgtgcaaacaatgtggaaaggggtt 120
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 651 acatgaaataatccacagtggcatcaaaccctacatgtgcaaacaatgtggaaaggggtt 592
Query: 121 tctctgctctactactcttcggagtcatgagaagatccacagtggcagtaacccgtatgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 tctctgctctactactcttcggagtcatgagaagatccacagtggcagtaacccgtatgt 532
Query: 181 atgttcacaatgtgagaaagttgtgagttctgagagcactttgcggaaacataaaatgat 240
|||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 531 atgttctcaatgtgagaaagttgtgagttctgagagcgctttgcggaaacataaaatgat 472
Query: 241 ccacactggagagaagccttgtgtctgtaagcaatgtggcaaaacattcactcatctaag 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 471 tcacactggagagaagccttgtgtctgtaagcaatgtggcaaaacattcactcatttaag 412
Query: 301 ttctcttcagtaccatgcactgatgcacagcggagagaaaccccatgaatgtaagaaatg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 411 ttctcttcagtaccatgcactgatgcacagcggagagaaaccccatgaatgtaagaaatg 352
Query: 361 cgggaaaggctttcggtctcttagtcaccttaaaaagcacgagagaactcaacactaaat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 cgggaaaggctttcggtctcttagtcaccttaaaaagcacgagagaactcaacactaaat 292
Query: 421 agaaactatatgcatggaagcaatatgggaaagccataggcagtggcataaatccatagg 480
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 291 agaaactatatgcatggaagcaatatgggaaagccatacacagtggcataaatccatagg 232
Query: 481 cttctttgtaagcagtgtttacagcctttaa 511
||| ||||||||||||||| |||||||||||
Sbjct: 231 cttgtttgtaagcagtgttcacagcctttaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 511
Length of database: 911
Length adjustment: 10
Effective length of query: 501
Effective length of database: 901
Effective search space: 451401
Effective search space used: 451401
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no336_e07.g1 MSMg01no336_e07.g1 CHROMAT_FILE:
MSMg01no336_e07.g1 PHD_FILE: MSMg01no336_e07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:24:18 2005
(338 letters)
>mm_chr17_32778739_32779476
Length = 738
Score = 538 bits (278), Expect = e-157
Identities = 314/332 (94%), Gaps = 10/332 (3%)
Strand = Plus / Plus
Query: 1 cagaggaagaggggaaagttatactggattgttactcgagagaaagtgccagcctggatg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct: 201 cagaggaagaggggaaagttatactggattgttactcgagagaaagtgccagcctagagg 260
Query: 61 tggtaggactggcccatcctagtctagacaggtgaggaagccagctgaccaggcatggca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tggtaggactggcccatcctagtctagacaggtgaggaagccagctgaccaggcatggca 320
Query: 121 gcagcagggagccaggcaaccactgagacaaatgtttttgaataactgaacccctagtaa 180
|||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcagcagggaaccaggcaaccaccgagacaaatgtttttgaataactgaacccctagtaa 380
Query: 181 cttctatgtaatttagggaggtcttgattctgaccagtcattccttcctct--------- 231
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cttctatgtaatttagggaggtcttgattctgaccagtcattccttcctcttccctcctc 440
Query: 232 -cccccatttattgtttatctcaccttagtgctcctcctcctcctcttcctcctcctggt 290
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 441 tcccccatttagtgtttatctcaccttagtgctcctcctcctcctcttcctcctcctgct 500
Query: 291 gcctcttcacctgaggttcattatgtctcctt 322
|||||||| |||||| ||||||||||||||||
Sbjct: 501 gcctcttcgcctgagtttcattatgtctcctt 532
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 338
Length of database: 738
Length adjustment: 9
Effective length of query: 329
Effective length of database: 729
Effective search space: 239841
Effective search space used: 239841
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
