Query= MSMg01no337_f22.b1 MSMg01no337_f22.b1 CHROMAT_FILE:
MSMg01no337_f22.b1 PHD_FILE: MSMg01no337_f22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:43 2005
(625 letters)
>mm_chr17_46059014_46060042
Length = 1029
Score = 1166 bits (603), Expect = 0.0
Identities = 618/625 (98%), Gaps = 4/625 (0%)
Strand = Plus / Plus
Query: 5 gaattcattttggttgcatgggtgcatgtgatgtctgtgtgtgctgtgtgagaaggcaca 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcattttggttgtatgggtgcatgtgatgtctgtgtgtgctgtgtgagaaggcaca 264
Query: 65 cgagtatccacagggatcgaaggagggcatgggaccctcccccctggagctggtgtgaca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cgagtatccacagggatcgaaggagggcatgggaccctcccccctggagctggtgtgaca 324
Query: 125 agagtgctggggacagaacccaggtcctctgcaagggctgcaggtgctcttagcctctga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agagtgctggggacagaacccaggtcctctgcaagggctgcaggtgctcttagcctctga 384
Query: 185 gtcatctcaccagcttgatgcgtgaaatgttttaaacctcaaggccctgtacccagcagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtcatctcaccagcttgatgcgtgaaatgttttaaacctcaaggccctgtacccagcagc 444
Query: 245 ctggtgtgtataatagataaacagaagtgataaggttattagtgggcacag----ggggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 ctggtgtgtataatagataaacagaagtgataaggttattagtgggcacagtgggggggg 504
Query: 301 ggctgctttcctatctctctggctaaacaggcttttaagctgaggtcgccaatggagaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggctgctttcctatctctctggctaaacaggcttttaagctgaggtcgccaatggagaca 564
Query: 361 aacatccccagctgtccccagagccaccagtgtctccaggactaccatagcccattcaca 420
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 565 aacatccccagctgtccccagagccaccagtgtctccaggtctaccatagcccattcaca 624
Query: 421 tccaaaagcatcagcctacagatcccagctcctaccaccagtgatgccctggacactgat 480
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tccaacagcatcagcctacagatcccagctcctaccaccagtgatgccctggacactgat 684
Query: 481 gtttcttcctggggaacctcctccctggggttactcatcccagcccgagggtcacaggct 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 gtttcttcctggggaacctcctccctggggttactcatcccagcccgagggtcacaggct 744
Query: 541 accttccatgctgtctccagaccggttatgagtctttaaacatatacccaaaagctcatg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 accttccatgctgtctccagaccggttatgagtctttaaacatatacccaaaagctcatg 804
Query: 601 gggttggagcttggtcactgaactg 625
|||||||||||||||||||||||||
Sbjct: 805 gggttggagcttggtcactgaactg 829
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 625
Length of database: 1029
Length adjustment: 10
Effective length of query: 615
Effective length of database: 1019
Effective search space: 626685
Effective search space used: 626685
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no337_f22.g1 MSMg01no337_f22.g1 CHROMAT_FILE:
MSMg01no337_f22.g1 PHD_FILE: MSMg01no337_f22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:25:44 2005
(345 letters)
>mm_chr17_46232297_46233041
Length = 745
Score = 640 bits (331), Expect = 0.0
Identities = 341/345 (98%), Gaps = 2/345 (0%)
Strand = Plus / Minus
Query: 1 tgattcatggctgtgctagagacctgctgttccagaccacagcttcctagcacggtcaca 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 477 tgattcatggctgtgctagagacccgctgttccagaccacagcttcctagcacggtcaca 418
Query: 61 cagcagactgtgagagtttagaacacagccctgtcagtatcaggcaccagagagagggct 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 417 cagcagactgtgagagtttagaacacagccctgtcagtatcagacaccagagagagggct 358
Query: 121 ccagccgcctacctatctacccaaagggctggggaaatcagggtcttggactagcaaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ccagccgcctacctatctacccaaagggctggggaaatcagggtcttggactagcaaagc 298
Query: 181 aacttgtgtgggccttccacctgtcttctaactgaggtttatggtgacaatttatatgta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 aacttgtgtgggccttccacctgtcttctaactgaggtttatggtgacaatttatatgta 238
Query: 241 ggttgttatcttaggaaggcattttctctagactatttgtgtgtgtgtgcaagtgtgtgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 237 ggttgttatcttaggaaggcattttctctagactatttgtgtgtgtgtgcaagtgtgtgt 178
Query: 301 gctcatccgtgcacatgcatgtgtgt--atgtgtgtgtgtgtgtg 343
|||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 177 gctcatccgtgcacatgcatgtgtgtgtatgtgtgtgtgtgtgtg 133
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
