Query= MSMg01no338_d22.b1 MSMg01no338_d22.b1 CHROMAT_FILE:
MSMg01no338_d22.b1 PHD_FILE: MSMg01no338_d22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:50 2005
(551 letters)
>mm_chr17_41519716_41520666
Length = 951
Score = 1002 bits (518), Expect = 0.0
Identities = 521/522 (99%)
Strand = Plus / Minus
Query: 5 gaattcctgaaactcacattaataaactaatggtaaaacttcaggaaactacgtggccca 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gaattcctgaaactcagattaataaactaatggtaaaacttcaggaaactacgtggccca 463
Query: 65 gaaaaaaagtagctacttagtgaaaatctaggcgttgggcacaggatacctccaggaagc 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gaaaaaaagtagctacttagtgaaaatctaggcgttgggcacaggatacctccaggaagc 403
Query: 125 ttcagaagtaccaaaaaacagcacaatcgattgactttgtgctcagttgcccaacaaaaa 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ttcagaagtaccaaaaaacagcacaatcgattgactttgtgctcagttgcccaacaaaaa 343
Query: 185 aagatgcaggaaacagagaagtaaacctcccatgaacaggaaactctctacttacagtct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 aagatgcaggaaacagagaagtaaacctcccatgaacaggaaactctctacttacagtct 283
Query: 245 agcttacataattccagaatatactgtacaagctcccgggagagcagaaatcactgcatt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 agcttacataattccagaatatactgtacaagctcccgggagagcagaaatcactgcatt 223
Query: 305 ctaaatgctggggtttctggcaatgaccattggtgcagtgactgcatgatgcttatgtgg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 222 ctaaatgctggggtttctggcaatgaccattggtgcagtgactgcatgatgcttatgtgg 163
Query: 365 aaaactcactgattgcataaagaacctgcttcctaaagagataactgcttcctaaagaga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 aaaactcactgattgcataaagaacctgcttcctaaagagataactgcttcctaaagaga 103
Query: 425 ttccatgcctggtactgtaaacctagcccttatttgggaaatgttagacctacaggggaa 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 102 ttccatgcctggtactgtaaacctagcccttatttgggaaatgttagacctacaggggaa 43
Query: 485 cttactgtgactttgctataaggtcatgttgtcaaactgcct 526
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 42 cttactgtgactttgctataaggtcatgttgtcaaactgcct 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 551
Length of database: 951
Length adjustment: 10
Effective length of query: 541
Effective length of database: 941
Effective search space: 509081
Effective search space used: 509081
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_d22.g1 MSMg01no338_d22.g1 CHROMAT_FILE:
MSMg01no338_d22.g1 PHD_FILE: MSMg01no338_d22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:26:50 2005
(588 letters)
>mm_chr17_41341620_41342605
Length = 986
Score = 1125 bits (582), Expect = 0.0
Identities = 586/588 (99%), Gaps = 2/588 (0%)
Strand = Plus / Plus
Query: 1 tttccccttacacagattcatctccgtaaccagtagagagagctcaggcttctgcacaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttccccttacacagattcatctccgtaaccagtagagagagctcaggcttctgcacaga 260
Query: 61 tgccctcctgggatgttctgatgttgactattaaagaagatcatacatttccagaatcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgccctcctgggatgttctgatgttgactattaaagaagatcatacatttccagaatcaa 320
Query: 121 taattgtatcttttcattacggcttatttcgagaactatctcagcacaattcagggactg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 taattgtatcttttcattacggcttatttcgagaactatctcagcacaattcagggactg 380
Query: 181 attcttgatcgtcatttttctttttattatataatatcttagcaaccaagatttattcag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 attcttgatcgtcatttttctttttattatataatatcttagcaaccaagatttattcag 440
Query: 241 tggtcaggttgaaagaaaatgacacctgatgcagacatatttagcatggcatcttgtcaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tggtcaggttgaaagaaaatgacacctgatgcagacatatttagcatggcatcttgtcaa 500
Query: 301 attaaggagaacattgtattaatgatacaatttgaaaacgagtatcaaactattaaaaga 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 attaaggagaacattgtattaatgatacaatttgaaaacgagtatcaaactattaaaaga 560
Query: 361 actgtaaatatatggacaatgcagaagtaattaattaaaaacagttttttgatagaatta 420
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 561 actgtaaatatatggacaatgcagaagtaattaattaaaaa--gttttttgatagaatta 618
Query: 421 tatttttctataaatgtccatcttgtttatgcttcctataaacactgatgtagcaaaatc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 tatttttctataaatgtccatcttgtttatgcttcctataaacactgatgtagcaaaatc 678
Query: 481 ttttatgcatttttagagttcaataaaaacattaaagtgagtggcatacgtaaatcactt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ttttatgcatttttagagttcaataaaaacattaaagtgagtggcatacgtaaatcactt 738
Query: 541 cctttaccttcttataaaacagtcaggctttgttaaaggacactcaaa 588
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 739 cctttaccttcttataaaacagtcaggctttgttaaaggacactcaaa 786
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 588
Length of database: 986
Length adjustment: 10
Effective length of query: 578
Effective length of database: 976
Effective search space: 564128
Effective search space used: 564128
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
