Query= MSMg01no338_h11.b1 MSMg01no338_h11.b1 CHROMAT_FILE:
MSMg01no338_h11.b1 PHD_FILE: MSMg01no338_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:06 2005
(689 letters)
>mm_chr17_32775925_32777014
Length = 1090
Score = 1259 bits (651), Expect = 0.0
Identities = 678/689 (98%), Gaps = 5/689 (0%)
Strand = Plus / Plus
Query: 4 ggaattctgctc---attttccaacaccccttctggtgaggtaagcagatgacccctgta 60
|||||||||||| | || ||||||||||||||||||||||| |||||||||||||||
Sbjct: 204 ggaattctgctcagaa--ttgcaacaccccttctggtgaggtaaacagatgacccctgta 261
Query: 61 ggcttaaaggggagaacaggaatttggaaggttctactatccagcaggttttttgttgtt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ggcttaaaggggagaacaggaatttggaaggttctactatccagcaggttttttgttgtt 321
Query: 121 gttgttgttttgttttgattttgatttttaaaaacatgttgtagaaacgtttaatctgaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gttgttgttttgttttgattttgatttttaaaaacatgttgtagaaacgtttaatctgaa 381
Query: 181 tccagggtttctaccacacctttgaccatttagttaccagataaaagacacatacatcct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 tccagggtttctaccacacctttgaccatttagttaccagataaaagacacatacatcct 441
Query: 241 ttatattttcaataagccttaagcaggatgaggaatgtgcagatatataccctgtatgtt 300
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 442 ttatattttcaataagccttaagcaggatgaggaatgggcagatatataccctgtatgtt 501
Query: 301 atcagaatctacgttcttatcgataatcctgaggtattacctactatgtttcatctgggc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 atcagaatctacgttcttatcgataatcctgaggtattacctactatgtttcatctgggc 561
Query: 361 tgcttttaactccaattggccagaccacagggcatgttttcttgactcctaaccatggtg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgcttttaactccaattggccagaccacagggcatgttttcttgactcctaaccatggtg 621
Query: 421 ctctctctcctccttcaccttttctccccctccatggttttctcttgaccccacaggcct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 ctctctctcctccttcaccttttctccccctccatggttttctcttgaccccacaggcct 681
Query: 481 gggaaccctagaacccacctatgtctcttctgcccagctattagctgtcagcatctttat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 gggaaccctagaacccacctatgtctcttctgcccagctattagctgtcagcatctttat 741
Query: 541 ttaccaatcagaaataatttgaaggcaaggtcacatagccacttgggtctacatgcagag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 ttaccaatcagaaataatttgaaggcaaggtcacatagccacttgggtctacatgcagag 801
Query: 601 tctcttgtctttggggtaaccaggtcttgggggccacagttagccttgtaatacacagca 660
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 802 tctcttgtctttggggtaaccaggtcttgggggccacagttaacattgtaatacacagca 861
Query: 661 aaagaccaaacctaataataacaatgcaa 689
||||||||||||||||||||| |||||||
Sbjct: 862 aaagaccaaacctaataataataatgcaa 890
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 689
Length of database: 1090
Length adjustment: 10
Effective length of query: 679
Effective length of database: 1080
Effective search space: 733320
Effective search space used: 733320
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no338_h11.g1 MSMg01no338_h11.g1 CHROMAT_FILE:
MSMg01no338_h11.g1 PHD_FILE: MSMg01no338_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:27:06 2005
(565 letters)
>mm_chr17_32910305_32911269
Length = 965
Score = 804 bits (416), Expect = 0.0
Identities = 430/436 (98%), Gaps = 3/436 (0%)
Strand = Plus / Minus
Query: 1 ctataagtggaaacctctatgaacaccatttggttcaatgaacagacaaggaaagaactt 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 ctattagtggaaacctctatgaacaccatttggttcaatgaacagacaaggaaagaactt 377
Query: 61 gatccggagtgctaatcttctcaaaagagatgttcaaggtttcatttggcacagatggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 gatccggagtgctaatcttctcaaaagagatgttcaaggtttcatttggcacagatggta 317
Query: 121 acacatatcggatgaaaacctttgctgttgaaaaacattggaaaatctagagcaaagtcc 180
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 316 acacatatcggatgaaaacttttgctgttgaaaaacattggaaaatctagagcaaagtcc 257
Query: 181 tttgaaatttttttcatgtttaatctgataaatgtcagtattatgaaggactggacatat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 tttgaaatttttttcatgtttaatctgataaatgtcagtattatgaaggactggacatat 197
Query: 241 tttattttatt---ttttttttgtagcatgctccaggaaatgcacactctggtgagaatg 297
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 196 tttattttattattttttttttgtagcatgctccaggaaatgcacactctggtgagaatg 137
Query: 298 ttatcagtacagtattttgtatttattgaaatgtttcaggggctgatagggatgagttag 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ttatcagtacagtattttgtatttattgaaatgtttcaggggctgatagggatgagttag 77
Query: 358 cctttaagagcatctgctgctccttccaaaggacattgagttggcctttaagagcatttg 417
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 cctttaagagcatcttctgctccttccaaaggacattgagttggcctttaagagcatttg 17
Query: 418 ctttttagcaccacgt 433
||||||||||||||||
Sbjct: 16 ctttttagcaccacgt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 565
Length of database: 965
Length adjustment: 10
Effective length of query: 555
Effective length of database: 955
Effective search space: 530025
Effective search space used: 530025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
