ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTTGCCTATTACTTCAGACAATGTTGTACTGGTTCCATAGCAATTTG
ATTTGTGAAAGTTCTCAGGAAAAGAAAACTTCCCATCAAGACTCCAATTT
CCATAGATCTTGGAATTTTACTGATTTTTCTCCTCAAAATGATGAATGTT
TTTTAAATAAATATTTTTATGTGTGATAGCCTCAGAACATTTTCTTGTCA
GAATAATATAGAATTCTTATAAAAAGAAGGGAACATAGTGCAAATAAATA
TGGTGGCCTATTTATTTGTCCAAATACTACCAGTTTTGAATACTTATATT
ATGTATATTATACTATAGAGACAAAAAGGTCTATTTTTTTCTCCCTCATT
TGTATATCTAGGAAGTAAATCTAAACCAAATCAATCAAATCAAACAAAAC
AGTTTATGTAAACCAGGGTTTGAAGAATTATCCCATGAATAAAAGACCTA
ACTCAATTCCTAAGGTCTATGGGTAAAATTAATGTGGAAGCAACGTCAAA
GGCTGGGTGTGCTTCATACTCATTGTTGGGACACCCTTGTAGCAGGGAGG
GAAGCACGCTATAACCATTAAATAGACCCTCACCTCTGCTCATCCCTTCC
AAACTTCTAAAATTCCAGTGTGGCACACAGCATATTTTACAGCTGGTTAA
ATCAGACCTATAAAACCATTTTTTTTTCTACTTGCTTTT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXCTGTCTGTATAAACAACTAGGTCTC
TGATTCTCTTACCTTCTCTTGGGCTCTTTTTTCCCTGTTGTTTCTTCTTT
CAACTTCAATGTGATAGCTTTTGTTTTATCCTACTATATTTTATTTTGTT
TTATTAGTAGTATTATATTATCTTTTAGAAGCTTTTTTTTCTAATGAGAG
ATAGAAAAGGAATGGGTAATGATGGAAGAGAAGGTGAGGAATAACTCAGA
GGAATAAAGGAAGGGTAAACTGGAATCAGGATATAGTATGTGAAAAAAGT
ATTTCTTTTCAATAATAGGAAAAAAGAAAATATACAGAAGTAAAATATAG
ATTATTTAAAAAGAAGAATTAAATTAAAATACATGTGACAAGAATAGTAA
ATGGGGCCGGGCAGTGGTGGTGCATGCCTTTAATCTCAGCACTTGGGAGG
CAGAGGCAGGCGGATTTTTGAGTTCGAGGCCAGTCTGGTCTACAGAGTGA
GTTCCAGGACAGCCAGGGCTACACAGAGAAACCTTGTCTCANAAAACAAA
ACAAAAAAACAAAACAAAACAAAACTCCAAAAAGAAAAGAANAGAAAGAA
AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAG
AGAGAGANAAAGTAGGGAAGGAAAGGATGTANTTNNTTANNNTTTTTGTT
TTTTTTTTTTTT

Query= MSMg01no339_m15.b1 MSMg01no339_m15.b1 CHROMAT_FILE:
MSMg01no339_m15.b1 PHD_FILE: MSMg01no339_m15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:28:42 2005
         (574 letters)



>mm_chr17_41621773_41622746
          Length = 974

 Score = 1087 bits (562), Expect = 0.0
 Identities = 568/570 (99%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctttgcctattacttcagacaatgttgtactggttccatagcaatttgatttgtg 64
           |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 947 gaattctttgccaattacttcagacaatgttgtactggttccatagcaatttgatttgtg 888

                                                                       
Query: 65  aaagttctcaggaaaagaaaacttcccatcaagactccaatttccatagatcttggaatt 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 887 aaagttctcaggaaaagaaaacttcccatcaagactccaatttccatagatcttggaatt 828

                                                                       
Query: 125 ttactgatttttctcctcaaaatgatgaatgttttttaaataaatatttttatgtgtgat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 827 ttactgatttttctcctcaaaatgatgaatgttttttaaataaatatttttatgtgtgat 768

                                                                       
Query: 185 agcctcagaacattttcttgtcagaataatatagaattcttataaaaagaagggaacata 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 767 agcctcagaacattttcttgtcagaataatatagaattcttataaaaagaagggaacata 708

                                                                       
Query: 245 gtgcaaataaatatggtggcctatttatttgtccaaatactaccagttttgaatacttat 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 707 gtgcaaataaatatggtggcctatttatttgtccaaatactaccagttttgaatacttat 648

                                                                       
Query: 305 attatgtatattatactatagagacaaaaaggtctatttttttctccctcatttgtatat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 647 attatgtatattatactatagagacaaaaaggtctatttttttctccctcatttgtatat 588

                                                                       
Query: 365 ctaggaagtaaatctaaaccaaatcaatcaaatcaaacaaaacagtttatgtaaaccagg 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 ctaggaagtaaatctaaaccaaatcaatcaaatcaaacaaaacagtttatgtaaaccagg 528

                                                                       
Query: 425 gtttgaagaattatcccatgaataaaagacctaactcaattcctaaggtctatgggtaaa 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 527 gtttgaagaattatcccatgaataaaagacctaactcaattcctaaggtctatgggtaaa 468

                                                                       
Query: 485 attaatgtggaagcaacgtcaaaggctgggtgtgcttcatactcattgttgggacaccct 544
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 467 attaatgtggaagcaacgtcaaaggctgggtgtgcttcacactcattgttgggacaccct 408

                                         
Query: 545 tgtagcagggagggaagcacgctataacca 574
           ||||||||||||||||||||||||||||||
Sbjct: 407 tgtagcagggagggaagcacgctataacca 378


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 574
Length of database: 974
Length adjustment: 10
Effective length of query: 564
Effective length of database: 964
Effective search space:   543696
Effective search space used:   543696
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)