XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTCAGTT
CACATCTATATCACACTCTTTTTATTATTCTCTTGCTGCCATTTCAAATA
AAGTTTATTTATTGTATAAGCATTAGGTGAAATGTGGTCAAATTCAATAG
ATCACCAGGAGCAGCAATATGGGCAGAGTAATGAGGACAGTTAATCACTT
CTAGTTTGATCTCTGAGGGATTTTCTACATAGATACAACTTTAAGCTTAC
ACTTTGTTTTCACTGAACCAACATGGACATTTGAACAGATATGGCATAGA
AGGAATAGACCTTGGCAGTCTTTTTTTCTCTTATACCTGTTATACTATTA
TTCCAGTAGCAAATCTGGAAAGTATTGGCCCTGAATCCAATTACTCTCTA
CTTGAAACCTATACTCTACTGTATGTTCTATCCATGTGAAAATTATTTTC
CAACTTAAGTCTTCTAAACTGGCAGAAGTTTTAGGAGAAGATACTCTCTT
AAGCAGCTTCTTGTGGGACACCAGAAATCCAGCAGATATGTGACAGAGAC
TGTGCACCAGATTAAAGAGGAGTTGGAACACAAACCCACCAAATACTCAA
GCTGAAAAGAGTCTTGATGGTGACATGATTCAAGGAAAGCGTTTTTGCTT
CTTGGGGATCCAAACACTGATCGGCTAGAGAACCCTTCCAGGGCTCCCCC
AGGGAATATTTGGATTATN

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXAGAGACTGCTGTGATGTGCAAAGGCTTTACCACAGT
GAGTACATTCATAAGGTTTCTCTACAGTATGTGTTCTTCTCTGCATTTGG
TTATACAAGGGTTTGCCACATTGCTTGCATTCACCTGGCTTCTCTCCACT
ATGAATAATGTCATGATGTTGATTACAGAAATGTGCAAAGCCTTCACATT
ATTCAGAAAGTTTCTCTCCCATATGATTTTTTTTCACGCCTTTGAATGTG
ACTGTGATGTGAAAAGGCTTTATCACATTGTTTACACTTGTGGGGTTTCT
CTCTAGTATGTTTTCTTTTATACATTTCAAGATAACTCTGATATGCAAAG
CCTTTATCTCATTGAGTCCATTTATAATGTTTCTTTCCAGTATTTGTTGT
TTTCTACATTTGGTGATAACTGTGATGTGCAAAGGGTTTACGACAGTGCT
TGCATTCATACGGTTTCACTCCAGTATGAATACTGTCATGGTCATGAAGG
CTTCAGAAATGTCCAAAGGTTTTTAAATATTAAATACATTTATAAGATTT
CTCTCCAAGATATTTCTTGCATTGCCTTTGAGATGATTGTGAATTAAAAG
GCTTTACCACTTTGATTCCTTTGGAAGAGTTTTGTTCCGCAAAAATTTTT
AATACTTTGAGTTCCCCTG

Query= MSMg01no342_p18.b1 MSMg01no342_p18.b1 CHROMAT_FILE:
MSMg01no342_p18.b1 PHD_FILE: MSMg01no342_p18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:32:39 2005
         (526 letters)



>mm_chr17_92622657_92623582
          Length = 926

 Score =  924 bits (478), Expect = 0.0
 Identities = 517/536 (96%), Gaps = 11/536 (2%)
 Strand = Plus / Plus

                                                                       
Query: 1   tctatatcacactctttttattattctcttgctgccatttcaaataaagtttatttattg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 tctatatcacactctttttattattctcttgctgccatttcaaataaagtttatttattg 251

                                                                       
Query: 61  tataagcattaggtgaaatgtggtcaaattcaatagatcaccaggagcagcaatatgggc 120
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 252 tataagcattaggtgaaatgtggtcaaattcaatagatcaccaggagcagcagtatgggc 311

                                                                       
Query: 121 agagtaatgaggacagttaatcacttctagtttgatctctgagggattttctacatagat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 agagtaatgaggacagttaatcacttctagtttgatctctgagggattttctacatagat 371

                                                                       
Query: 181 acaactttaagcttacactttgttttcactgaaccaacatggacatttgaacagatatgg 240
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 acaacttaaagcttacactttgttttcactgaaccaacatggacatttgaacagatatgg 431

                                                                       
Query: 241 catagaaggaatagaccttggcagtctttttttctcttatacctgttatactattattcc 300
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 432 catagaaggaatagaccttggcagtctttttt-ctcttatacctgttatactattattcc 490

                                                                       
Query: 301 agtagcaaatctggaaagtattggccctgaa----------tccaattactctctacttg 350
           ||||||| |||||||||||| ||||||||||          | |||||||||||||||||
Sbjct: 491 agtagcatatctggaaagtaatggccctgaaggttagtgaattcaattactctctacttg 550

                                                                       
Query: 351 aaacctatactctactgtatgttctatccatgtgaaaattattttccaacttaagtcttc 410
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 551 aaacctatactctactgtatgttctatccatgtgaaaattattttccaacttaagtcttc 610

                                                                       
Query: 411 taaactggcagaagttttaggagaagatactctcttaagcagcttcttgtgggacaccag 470
           ||||||||||||||||||||||| ||||||| |||||||||||||||| |||||||||||
Sbjct: 611 taaactggcagaagttttaggaggagatactgtcttaagcagcttcttatgggacaccag 670

                                                                   
Query: 471 aaatccagcagatatgtgacagagactgtgcaccagattaaagaggagttggaaca 526
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 aaatccagcagatatgtgacagagactgtgcaccagattaaagaggagttggaaca 726


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 526
Length of database: 926
Length adjustment: 10
Effective length of query: 516
Effective length of database: 916
Effective search space:   472656
Effective search space used:   472656
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)