Query= MSMg01no344_e17.b1 MSMg01no344_e17.b1 CHROMAT_FILE:
MSMg01no344_e17.b1 PHD_FILE: MSMg01no344_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:25 2005
(458 letters)
>mm_chr17_81991714_81992574
Length = 861
Score = 845 bits (437), Expect = 0.0
Identities = 454/461 (98%), Gaps = 3/461 (0%)
Strand = Plus / Minus
Query: 1 aaggatttatgatggtatattgtatatttccatacttttcaaataaacctctttcttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 661 aaggatttatgatggtatattgtatatttccatacttttcaaataaacctctttcttttc 602
Query: 61 tcagaattttcattctgagactcggaatgaaaactgtcccttggaagttgtgaatgaggc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 601 tcagaattttcattctgagactcggaatgaaaactgtcccttggaagttgtgaatgaggc 542
Query: 121 ccataattcactc---tagagcctattggcggtttcctccttgacaccactccactcgag 177
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 541 ccataattcactctcttagagcctattggcggtttcctccttgacaccactccactcgag 482
Query: 178 gctctctccttttcttagctctagttcttgactctaagcatactgtgttgagagttcctg 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 481 gctctctccttttcttagctctagttcttgactctaagcatactgtgttgagagttcctg 422
Query: 238 ttggatctaaccctgtacaaaaagtgtttgcctttatttttccatggccttttgatgtgt 297
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 421 ttggatctaaccctgtacaaaaagcgtttgcctttatttttccatggccttttgatgtgt 362
Query: 298 ctctacccagaagccagagggaggttattacatccctgtgtaaagccttccaaaactccc 357
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctctacccagaagccagagggaggttattacatccctgtgtaaagccttccaaaactccc 302
Query: 358 attgtccttgtgacaaagttctttttccgtatgtaatatggatgctacccaataaaacat 417
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 301 attgtccttgtgacaaagttctttttccggatgtaatatggatgctacccaataaaacac 242
Query: 418 taatgagctatgtgtctagctttacctttacttacttggca 458
|||||||||||||||||| ||||||||||||||||||||||
Sbjct: 241 taatgagctatgtgtctaactttacctttacttacttggca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 458
Length of database: 861
Length adjustment: 10
Effective length of query: 448
Effective length of database: 851
Effective search space: 381248
Effective search space used: 381248
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no344_e17.g1 MSMg01no344_e17.g1 CHROMAT_FILE:
MSMg01no344_e17.g1 PHD_FILE: MSMg01no344_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:34:26 2005
(477 letters)
>mm_chr17_81874202_81875079
Length = 878
Score = 897 bits (464), Expect = 0.0
Identities = 474/478 (99%), Gaps = 1/478 (0%)
Strand = Plus / Plus
Query: 1 ctttttgatattaagaattatttcttacttgatgctatggcaatcacattcatttgagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctttttgatattaagaattatttcttacttgatgctatggcaatcacattcatttgagaa 260
Query: 61 catactaattaatcatattgctaaatatgcactgtgaaagtacaaggaagctatccccaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catactaattaatcatattgctaaatatgcactgtgaaagtacaaggaagctatccccaa 320
Query: 121 atgcttgcttggattcccagaaatgctaacaccagaagcaaaaacataagaagcaaagat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 atgcttgcttggattcccagaaatgctaacaccagaagcaaaaacataagaagcaaagat 380
Query: 181 gtagcattaggactaaaataagataccagagacagaagtgagatcagtggacaactaggg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtagcattaggactaaaataagataccagagacagaagtgagatcagtggacaactaggg 440
Query: 241 g-tgaaaagactgataatcaggactaacttcatgtttcagaaggttctaaggagatcatc 299
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ggtgaaaagactgataatcaggactaacttcatgtttcagaaggttctaaggagatcatc 500
Query: 300 cacagtttgtgattatcatagattagaagaactctgaagcaggatgccatggtcacacat 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cacagtttgtgattatcatagattagaagaactctgaagcaggatgccatggtcacacat 560
Query: 360 gatttcaagagccaattaaggacaattaagaaagtgtgtaagcttgcagttacaatttaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gatttcaagagccaattaaggacaattaagaaagtgtgtaagcttgcagttacaatttaa 620
Query: 420 gggaggaaaaggcataatagcgattcttannagtgttcttgatgtgaaatgaaaatca 477
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||
Sbjct: 621 gggaggaaaaggcacaatagcgattcttaaaagtgttcttgatgtgaaatgaaaatca 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 878
Length adjustment: 10
Effective length of query: 467
Effective length of database: 868
Effective search space: 405356
Effective search space used: 405356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
