NNAAAGTCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGACAATC
CGCGGAATTCTCCATATTTCTCCTGTTTAGAATGAGAATTCTGGGGTGAA
TGGACCTGAGCATACAATTTTAATATAAGAGGTTGAAAAAAAAAAAAACA
CTTAAGTTTATGAAACCTACCTTTCAAAGTAGTCATGTTCACTCCTATGA
TGGCTGAAGGGAAAAATATGGCCTGTAGTATTTGGCAACACTTGCTTTGT
GGTAGCTCAGTGTTTTCTTTATAAACAGGCGTGCATGACATGATTTTTTC
CATTGCTGTAACTGTGGCTTTGCCCTGAGTCATTTAAACCCTAGCAGGTT
CATTTGCATCTGTAACTGCAGCTACATCAGCCCCAGCCTGAGTGCTAAGC
CTCTACAGTCTGTCTCCCTCCATCATCTCTCCCTGGTTCCAACAGCTACA
TATGCACAATAACTGTGTGGAGTAATCTCACATCTATTGAAAGGTTACCC
TAGTGCANGACCAGCCCTATGAGGCAATAGAAATGTGCATTTTAATATAC
AAAGAAAAACTAGTTAAAGTTGCCCTGAAGGCAGGCCCTGAGAAACATGG
TCTGGTTAAATTATCTGGCCCATCAGAAAACACACTGGAATTTCTCCTTT
CTTGGCCCTTTTCAAAAGGGGATTCCCAAAAAAACCCCCCTCCCTGGGGA
AAGGGGGGGGGGGGGTGTGGGTGAAANNATATANATAACCTAATATAAAA
ACAATACAAAAAATCACATATTCTATTCTTTCTACCTGTTTT

GTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCATGTCAGCCAGGGCTACCCAAAGAAGCCCAGTC
TTAATTAAAAAACAACAACAACAACAACAAAAAAAAAACAATTAACATGA
TGATTTTCCTATGACTATCAAGATTTACTTTTCTTTATGGATGAATAAAA
TTCCTCCACGTATACCATATTGTCTCCTTCTGTTGATGGACACCTAGGAT
CATTTCATTTCCTGGTTACTGTGACTAGTGAACCAACAGTCATGGATGAA
CATCTGTCTCTATGTTGATTTGACTTAAGAGCCTTTGGGATGAATACCCA
AGGCTGACATTGCTGCGTCAGCTCTCTTCTCTCTTTTTCTATATTTATTT
TATGTATATGAGTACACTGCTACTCTCTTCAGACACAGCAGAAGAGGGCA
TCTGATCCCATTACAGATGGCTGTGAGCCGCCATGTGGTTGCTGGGAATT
GAACTCGGGACCTCTGGAAAAGCAGTCAATGCTCTTAACCACTGAGCCAT
TTCTCCAGTGCTCTCTATATATCTTAAAAATAACCATTTTCAGAGTGGCT
TCCCAAACCTACATTCCTATCAGTTAGTAGGTAAGAAGCCCTCTTTCTGC
ACATACTTGCCAGCATTTGATGTCATTATTTTCTTGAAAAGAGCCATTCT
CACTGAGATAAGGTGGAATTTAAAAACAGCGTTCCTTGAT

Query= MSMg01no344_l24.b1 MSMg01no344_l24.b1 CHROMAT_FILE:
MSMg01no344_l24.b1 PHD_FILE: MSMg01no344_l24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:35:02 2005
         (427 letters)



>mm_chr17_68468519_68469341
          Length = 823

 Score =  760 bits (393), Expect = 0.0
 Identities = 417/427 (97%), Gaps = 4/427 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   agaatgagaattctggggtgaatggacctgagcatacaattttaatataagaggttgaaa 60
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||   
Sbjct: 623 agaatgagaattctggggtgaatggacctgagcatacaattttaatataagaggttg--- 567

                                                                       
Query: 61  aaaaaaaaaacacttaagtttatgaaacctacctttcaaagtagtcatgttcactcctat 120
            |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 -aaaaaaaaccacttaagtttatgaaacctacctttcaaagtagtcatgttcactcctat 508

                                                                       
Query: 121 gatggctgaagggaaaaatatggcctgtagtatttggcaacacttgctttgtggtagctc 180
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 507 gatggctgaagggaaaaatatggcctgtagtatttggcaatacttgctttgtggtagctc 448

                                                                       
Query: 181 agtgttttctttataaacaggcgtgcatgacatgattttttccattgctgtaactgtggc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 agtgttttctttataaacaggcgtgcatgacatgattttttccattgctgtaactgtggc 388

                                                                       
Query: 241 tttgccctgagtcatttaaaccctagcaggttcatttgcatctgtaactgcagctacatc 300
           ||||||||||||||   |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 tttgccctgagtcaggcaaaccctagcaggttcatttgcatctgtaactgcagctacatc 328

                                                                       
Query: 301 agccccagcctgagtgctaagcctctacagtctgtctccctccatcatctctccctggtt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 agccccagcctgagtgctaagcctctacagtctgtctccctccatcatctctccctggtt 268

                                                                       
Query: 361 ccaacagctacatatgcacaataactgtgtggagtaatctcacatctattgaaaggttac 420
           |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 267 ccaacagctacatatgcacaataactgtgtggagtaatctcacatctattgagaggttac 208

                  
Query: 421 cctagtg 427
           |||||||
Sbjct: 207 cctagtg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 427
Length of database: 823
Length adjustment: 9
Effective length of query: 418
Effective length of database: 814
Effective search space:   340252
Effective search space used:   340252
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)