MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-347G07
Chromosome	17 (Build37)
Map Location	27,744,831 - 27,745,270
singlet/doublet	singlet
Overlap gene	Nudt3
Upstream gene	Ergic1, Atp6v0e, A930001N09Rik, Bnip1, Nkx2-5, Kifc1, Phf1, Cuta, Syngap1, Zbtb9, Bak1, Ggnbp1, Itpr3, 2900010M23Rik, Ihpk3, Lemd2, LOC100042713, ENSMUSG00000073430, Grm4, LOC677010, Hmga1, AI413582
Downstream gene	Rps10, Pacsin1, Spdef, LOC100042744, D17Wsu92e, EG666682, Snrpc, F830021D11Rik, Taf11, Anks1, Tcp11, 4930526A20Rik, Scube3, LOC100042764, Zfp523, Def6, Ppard, 1810013A23Rik, Fance, Rpl10a, Tead3, Tulp1, Fkbp5, 4930511I11Rik, Gm749, Clps, Tmhs, Srpk1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Ergic1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67458 MGI:1914708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Atp6v0e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11974 MGI:1328318
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A930001N09Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77128 MGI:1924378
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bnip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224630 MGI:109328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nkx2-5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18091 MGI:97350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Kifc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16580 MGI:109596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Phf1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21652 MGI:98647
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cuta (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67675 MGI:1914925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Syngap1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240057 MGI:3039785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins

name	Zbtb9 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:474156 MGI:1918022
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bak1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12018 MGI:1097161
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ggnbp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70772 MGI:3055306
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Itpr3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16440 MGI:96624
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2900010M23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67267 MGI:1914517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ihpk3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271424 MGI:3045325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lemd2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224640 MGI:2385045
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042713 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042713
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	ENSMUSG00000073430 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:100038429 MGI:3642687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Grm4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268934 MGI:1351341
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC677010 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 597 ESTs, 3 Proteins pseudo : _no_value

name	Hmga1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15361 MGI:96160
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	AI413582 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:106672 MGI:2146839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nudt3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56409 MGI:1928484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rps10 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67097 MGI:1914347
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pacsin1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23969 MGI:1345181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Spdef (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:30051 MGI:1353422
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042744 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042744
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	D17Wsu92e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224647 MGI:106281
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	EG666682 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666682 MGI:3644037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 164 ESTs, 3 Proteins pseudo : _no_value

name	Snrpc (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20630 MGI:109489
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	F830021D11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224648 MGI:3041238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Taf11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68776 MGI:1916026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Anks1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224650 MGI:2446180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tcp11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21463 MGI:98544
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930526A20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622485 MGI:3612449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 28 mRNAs, 158 ESTs, 3 Proteins

name	Scube3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:268935 MGI:3045253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042764 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042764
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 1 Protein

name	Zfp523 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:224656 MGI:2687278
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Def6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23853 MGI:1346328
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ppard (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19015 MGI:101884
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1810013A23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69050 MGI:1916300
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST

name	Fance (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72775 MGI:1920025
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs, 1 Protein

name	Rpl10a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19896 MGI:1343877
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tead3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21678 MGI:109241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tulp1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22157 MGI:109571
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fkbp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14229 MGI:104670
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4930511I11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67645 MGI:1914895
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm749 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328788 MGI:2685595
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Clps (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:109791 MGI:88421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmhs (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:328789 MGI:1915382
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Srpk1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20815 MGI:106908
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ergic1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118129827 GeneID:67458 MGI:1914708
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 transcript_id : NM_026170.3

name	Atp6v0e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:50659078 GeneID:11974 MGI:1328318
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ATPase, H+ transporting, lysosomal V0 subunit E transcript_id : NM_025272.2

name	A930001N09Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:30794195 GeneID:77128 MGI:1924378
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A930001N09 gene transcript_id : NM_029870.1

name	Bnip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142382697 GeneID:224630 MGI:109328
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2/adenovirus E1B interacting protein 1, NIP1 transcript_id : NM_172149.4

name	Nkx2-5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:76677926 GeneID:18091 MGI:97350
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : NK2 transcription factor related, locus 5 (Drosophila) transcript_id : NM_008700.2

name	Kifc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:116642892 GeneID:16580 MGI:109596
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : kinesin family member C1 transcript_id : NM_053173.2

name	Phf1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185927 GeneID:21652 MGI:98647
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : PHD finger protein 1 transcript_id : NM_009343.2

name	Cuta (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21702736 GeneID:67675 MGI:1914925
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cutA divalent cation tolerance homolog (E. coli) transcript_id : NM_026307.2

name	Cuta (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130306 GeneID:67675 MGI:1914925
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cutA divalent cation tolerance homolog (E. coli) transcript_id : NM_026948.2

name	Syngap1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268701 GeneID:240057 MGI:3039785
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 3 Proteins product : synaptic Ras GTPase activating protein 1 homolog (rat) transcript_id : XM_985548.2

name	Zbtb9 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54607173 GeneID:474156 MGI:1918022
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger and BTB domain containing 9 transcript_id : NM_001005916.2

name	Bak1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111955301 GeneID:12018 MGI:1097161
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BCL2-antagonist/killer 1 transcript_id : NM_007523.2

name	Ggnbp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54400750 GeneID:70772 MGI:3055306
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gametogenetin binding protein 1 transcript_id : NM_027544.1

name	Itpr3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:61102727 GeneID:16440 MGI:96624
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol 1,4,5-triphosphate receptor 3 transcript_id : NM_080553.2

name	2900010M23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802405 GeneID:67267 MGI:1914517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2900010M23 gene transcript_id : NM_026063.2

name	Ihpk3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376092 GeneID:271424 MGI:3045325
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : inositol hexaphosphate kinase 3 transcript_id : NM_173027.2

name	Lemd2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:22122562 GeneID:224640 MGI:2385045
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : LEM domain containing 2 transcript_id : NM_146075.1

name	LOC100042713 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268632 GeneID:100042713
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042713 transcript_id : XM_001478663.1

name	ENSMUSG00000073430 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268634 GeneID:100038429 MGI:3642687
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, ENSMUSG00000073430 transcript_id : XM_001478670.1

name	Grm4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:62945391 GeneID:268934 MGI:1351341
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutamate receptor, metabotropic 4 transcript_id : NM_001013385.1

name	Hmga1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198322 GeneID:15361 MGI:96160
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group AT-hook 1 transcript_id : NM_016660.2

name	Hmga1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198324 GeneID:15361 MGI:96160
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group AT-hook 1 transcript_id : NM_001039356.1

name	Hmga1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:86198320 GeneID:15361 MGI:96160
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : high mobility group AT-hook 1 transcript_id : NM_001025427.2

name	AI413582 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126157526 GeneID:106672 MGI:2146839
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : expressed sequence AI413582 transcript_id : NM_001002895.2

name	Nudt3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892043 GeneID:56409 MGI:1928484
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nudix (nucleotide diphosphate linked moiety X)-type motif 3 transcript_id : NM_019837.2

name	Rps10 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802751 GeneID:67097 MGI:1914347
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein S10 transcript_id : NM_025963.2

name	Pacsin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892741 GeneID:23969 MGI:1345181
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C and casein kinase substrate in neurons 1 transcript_id : NM_011861.2

name	Pacsin1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802835 GeneID:23969 MGI:1345181
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : protein kinase C and casein kinase substrate in neurons 1 transcript_id : NM_178365.2

name	Spdef (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802606 GeneID:30051 MGI:1353422
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SAM pointed domain containing ets transcription factor transcript_id : NM_013891.3

name	LOC100042744 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268636 GeneID:100042744
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100042744 transcript_id : XM_001478737.1

name	D17Wsu92e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461985 GeneID:224647 MGI:106281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 17, Wayne State University 92, expressed transcript_id : NM_001044719.1

name	D17Wsu92e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113461983 GeneID:224647 MGI:106281
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : DNA segment, Chr 17, Wayne State University 92, expressed transcript_id : NM_001033279.2

name	Snrpc (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87044893 GeneID:20630 MGI:109489
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : U1 small nuclear ribonucleoprotein C transcript_id : NM_011432.2

name	F830021D11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124107590 GeneID:224648 MGI:3041238
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA F830021D11 gene transcript_id : NM_001080769.1

name	Taf11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802483 GeneID:68776 MGI:1916026
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : NM_026836.2

name	Anks1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130667 GeneID:224650 MGI:2446180
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SAM domain containing 1 transcript_id : NM_181413.3

name	Tcp11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:24475950 GeneID:21463 MGI:98544
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : t-complex protein 11 transcript_id : NM_013687.2

name	Scube3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:52138545 GeneID:268935 MGI:3045253
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : signal peptide, CUB domain, EGF-like 3 transcript_id : NM_001004366.1

name	LOC100042764 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149268638 GeneID:100042764
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 1 Protein product : similar to collagen, type VIII, alpha 2 transcript_id : XM_001478777.1

name	Zfp523 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372958 GeneID:224656 MGI:2687278
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : zinc finger protein 523 transcript_id : NM_172617.2

name	Def6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142375804 GeneID:23853 MGI:1346328
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : differentially expressed in FDCP 6 transcript_id : NM_027185.2

name	Ppard (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:89001112 GeneID:19015 MGI:101884
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisome proliferator activator receptor delta transcript_id : NM_011145.3

name	1810013A23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268706 GeneID:69050 MGI:1916300
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 1 EST product : RIKEN cDNA 1810013A23 gene transcript_id : XM_001480179.1

name	Fance (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149268640 GeneID:72775 MGI:1920025
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 26 ESTs, 1 Protein product : Fanconi anemia, complementation group E transcript_id : XM_986338.2

name	Rpl10a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6755349 GeneID:19896 MGI:1343877
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ribosomal protein L10A transcript_id : NM_011287.1

name	Tead3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:117414171 GeneID:21678 MGI:109241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TEA domain family member 3 transcript_id : NM_011566.2

name	Tulp1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:33468972 GeneID:22157 MGI:109571
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tubby like protein 1 transcript_id : NM_021478.1

name	Fkbp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31560586 GeneID:14229 MGI:104670
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : FK506 binding protein 5 transcript_id : NM_010220.2

name	4930511I11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802254 GeneID:67645 MGI:1914895
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4930511I11 gene transcript_id : NM_026290.2

name	Gm749 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:85702210 GeneID:328788 MGI:2685595
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene model 749, (NCBI) transcript_id : NM_001034871.1

name	Clps (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142371729 GeneID:109791 MGI:88421
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : colipase, pancreatic transcript_id : NM_025469.2

name	Tmhs (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21311920 GeneID:328789 MGI:1915382
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tetraspan transmembrane protein, hair cell stereocilia transcript_id : NM_026571.1

name	Srpk1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803405 GeneID:20815 MGI:106908
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : serine/arginine-rich protein specific kinase 1 transcript_id : NM_016795.3

name	Ergic1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385678 CCDS:CCDS28553.1 GeneID:67458 MGI:1914708
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 protein_id : NP_080446.1

name	Atp6v0e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384606 CCDS:CCDS28554.1 GeneID:11974 MGI:1328318
definition	GO_component : GO:0016020 - membrane [Evidence ISS]; GO:0016469 - proton-transporting two-sector ATPase complex [Evidence IEA] GO_function : GO:0046933 - hydrogen-transporting ATP synthase activity, rotational mechanism [Evidence IEA]; GO:0046961 - hydrogen-transporting ATPase activity, rotational mechanism [Evidence IEA] GO_process : GO:0015991 - ATP hydrolysis coupled proton transport [Evidence ISS]; GO:0015986 - ATP synthesis coupled proton transport [Evidence IEA] codon_start : 1 note : ATPase, H+ transporting lysosomal (vacuolar proton pump), 9.2 kDa; lysosomal 9kDa; ATPase, H+ transporting, lysosomal 9kD V0 subunit E; ATPase, H+ transporting, V0 subunit product : ATPase, H+ transporting, V0 subunit e protein_id : NP_079548.1

name	A930001N09Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794196 GeneID:77128 MGI:1924378
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046983 - protein dimerization activity [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 product : hypothetical protein LOC77128 protein_id : NP_084146.1

name	Bnip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61098151 CCDS:CCDS28555.1 GeneID:224630 MGI:109328
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005783 - endoplasmic reticulum [Evidence IEA] [Evidence ISS]; GO:0030176 - integral to endoplasmic reticulum membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0031201 - SNARE complex [Evidence ISS] GO_function : GO:0003674 - molecular_function [Evidence ND]; GO:0005515 - protein binding [Evidence ISS] GO_process : GO:0006915 - apoptosis [Evidence ISS] [Evidence IEA]; GO:0016320 - endoplasmic reticulum membrane fusion [Evidence ISS]; GO:0007029 - endoplasmic reticulum organization and biogenesis [Evidence ISS]; GO:0006888 - ER to Golgi vesicle-mediated transport [Evidence IEA]; GO:0006917 - induction of apoptosis [Evidence ISS]; GO:0015031 - protein transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 exception : mismatches in translation note : SNARE protein SEC20 product : BCL2/adenovirus E1B 19kDa-interacting protein 1, NIP1 protein_id : NP_742161.3

name	Nkx2-5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679068 CCDS:CCDS28556.1 GeneID:18091 MGI:97350
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence IPI]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0007512 - adult heart development [Evidence IMP]; GO:0048738 - cardiac muscle development [Evidence IMP]; GO:0007275 - development [Evidence IEA]; GO:0035050 - embryonic heart tube development [Evidence IGI]; GO:0007507 - heart development [Evidence IMP]; GO:0001947 - heart looping [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI] [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : Drosophila NK2 transcription factor related, locus 5 product : NK2 transcription factor related, locus 5 protein_id : NP_032726.1

name	Kifc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:116642893 GeneID:16580 MGI:109596
definition	GO_component : GO:0005871 - kinesin complex [Evidence IEA] [Evidence ISS]; GO:0005874 - microtubule [Evidence IEA]; GO:0005875 - microtubule associated complex [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0003777 - microtubule motor activity [Evidence ISS] [Evidence IEA]; GO:0003774 - motor activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0007018 - microtubule-based movement [Evidence IEA]; GO:0007017 - microtubule-based process [Evidence IEA] codon_start : 1 note : kinesin family member C5A; kinesin-related protein KIFC5A; kinesin family c-terminal 5A; kinesin motor protein KIFC4 product : kinesin family member C1 protein_id : NP_444403.2

name	Phf1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185928 GeneID:21652 MGI:98647
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA] codon_start : 1 note : t-complex testis-expressed 3 product : PHD finger protein 1 protein_id : NP_033369.2

name	Cuta (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62198210 CCDS:CCDS28557.1 GeneID:67675 MGI:1914925
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1; divalent cation tolerant protein CUTA product : divalent cation tolerant protein CUTA isoform 1 protein_id : NP_080583.3

name	Cuta (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62198239 GeneID:67675 MGI:1914925
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2; divalent cation tolerant protein CUTA product : divalent cation tolerant protein CUTA isoform 2 protein_id : NP_081224.1

name	Syngap1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268702 GeneID:240057 MGI:3039785
definition	codon_start : 1 product : similar to SynGAP-a protein_id : XP_990642.2

name	Zbtb9 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54400753 GeneID:474156 MGI:1918022
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : zinc finger and BTB domain containing 9 protein_id : NP_001005916.1

name	Bak1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111955302 CCDS:CCDS28558.1 GeneID:12018 MGI:1097161
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_process : GO:0008635 - caspase activation via cytochrome c [Evidence IMP] codon_start : 1 note : Bcl2 homologous antagonist/killer product : BCL2-antagonist/killer 1 protein_id : NP_031549.2

name	Ggnbp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54400751 CCDS:CCDS28559.1 GeneID:70772 MGI:3055306
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence IDA]; GO:0016020 - membrane [Evidence IEA]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0004221 - ubiquitin thiolesterase activity [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA]; GO:0006511 - ubiquitin-dependent protein catabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : gametogenin binding protein 1 product : gametogenetin binding protein 1 protein_id : NP_081820.1

name	Itpr3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:61102728 CCDS:CCDS28560.1 GeneID:16440 MGI:96624
definition	GO_component : GO:0005783 - endoplasmic reticulum [Evidence IEA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005262 - calcium channel activity [Evidence IEA]; GO:0005509 - calcium ion binding [Evidence IEA]; GO:0005220 - inositol 1,4,5-triphosphate-sensitive calcium-release channel activity [Evidence IDA]; GO:0008095 - inositol-1,4,5-triphosphate receptor activity [Evidence IDA]; GO:0005216 - ion channel activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0006816 - calcium ion transport [Evidence IDA]; GO:0006811 - ion transport [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : inositol 1,4,5-triphosphate receptor 3 protein_id : NP_542120.2

name	2900010M23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385560 CCDS:CCDS28561.1 GeneID:67267 MGI:1914517
definition	codon_start : 1 product : hypothetical protein LOC67267 protein_id : NP_080339.1

name	Ihpk3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370542 CCDS:CCDS28562.1 GeneID:271424 MGI:3045325
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0050517 - inositol hexakisphosphate kinase activity [Evidence IEA]; GO:0008440 - inositol trisphosphate 3-kinase activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : inositol hexaphosphate kinase 3 protein_id : NP_766615.1

name	Lemd2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:22122563 GeneID:224640 MGI:2385045
definition	GO_component : GO:0005575 - cellular_component [Evidence ND]; GO:0005635 - nuclear envelope [Evidence IEA] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : nuclear envelope constituent product : LEM domain containing 2 protein_id : NP_666187.1

name	LOC100042713 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268633 GeneID:100042713
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478713.1

name	ENSMUSG00000073430 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268635 GeneID:100038429 MGI:3642687
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478720.1

name	Grm4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:62945392 CCDS:CCDS28563.1 GeneID:268934 MGI:1351341
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0001642 - group III metabotropic glutamate receptor activity [Evidence TAS]; GO:0008067 - metabotropic glutamate, GABA-B-like receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA] GO_process : GO:0007612 - learning [Evidence IMP]; GO:0007268 - synaptic transmission [Evidence IMP] codon_start : 1 note : G protein-coupled receptor GRM4; G protein-coupled receptor, family C, group 1, member D product : glutamate receptor, metabotropic 4 protein_id : NP_001013403.1

name	Hmga1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70909308 CCDS:CCDS28564.1 GeneID:15361 MGI:96160
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005694 - chromosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence ISS]; GO:0042975 - peroxisome proliferator activated receptor binding [Evidence ISS]; GO:0046965 - retinoid X receptor binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence ISS] GO_process : GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0006323 - DNA packaging [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS] codon_start : 1 note : high mobility group protein I product : high mobility group AT-hook 1 protein_id : NP_001020598.1

name	Hmga1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198325 CCDS:CCDS28564.1 GeneID:15361 MGI:96160
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005694 - chromosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence ISS]; GO:0042975 - peroxisome proliferator activated receptor binding [Evidence ISS]; GO:0046965 - retinoid X receptor binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence ISS] GO_process : GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0006323 - DNA packaging [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS] codon_start : 1 note : high mobility group protein I product : high mobility group AT-hook 1 protein_id : NP_001034445.1

name	Hmga1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:86198323 CCDS:CCDS28564.1 GeneID:15361 MGI:96160
definition	GO_component : GO:0000785 - chromatin [Evidence IEA]; GO:0005694 - chromosome [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0030374 - ligand-dependent nuclear receptor transcription coactivator activity [Evidence ISS]; GO:0042975 - peroxisome proliferator activated receptor binding [Evidence ISS]; GO:0046965 - retinoid X receptor binding [Evidence ISS]; GO:0003700 - transcription factor activity [Evidence ISS] GO_process : GO:0007001 - chromosome organization and biogenesis (sensu Eukaryota) [Evidence IEA]; GO:0006323 - DNA packaging [Evidence IEA]; GO:0045941 - positive regulation of transcription [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS] codon_start : 1 note : high mobility group protein I product : high mobility group AT-hook 1 protein_id : NP_057869.2

name	AI413582 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126157527 GeneID:106672 MGI:2146839
definition	codon_start : 1 product : hypothetical protein LOC106672 protein_id : NP_001002895.2

name	Nudt3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:9789933 CCDS:CCDS28566.1 GeneID:56409 MGI:1928484
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : diphosphoinositol polyphosphate phosphohydrolase product : nudix (nucleotide diphosphate linked moiety X)-type motif 3 protein_id : NP_062811.1

name	Rps10 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13399310 GeneID:67097 MGI:1914347
definition	GO_component : GO:0030529 - ribonucleoprotein complex [Evidence IEA] codon_start : 1 product : ribosomal protein S10 protein_id : NP_080239.1

name	Pacsin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754974 CCDS:CCDS28567.1 GeneID:23969 MGI:1345181
definition	GO_component : GO:0030137 - COPI-coated vesicle [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005802 - Golgi trans face [Evidence IDA] GO_function : GO:0008092 - cytoskeletal protein binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0045806 - negative regulation of endocytosis [Evidence IDA]; GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 note : Syndapin I product : protein kinase C and casein kinase substrate in neurons 1 protein_id : NP_035991.1

name	Pacsin1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46559412 CCDS:CCDS28567.1 GeneID:23969 MGI:1345181
definition	GO_component : GO:0030137 - COPI-coated vesicle [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0005802 - Golgi trans face [Evidence IDA] GO_function : GO:0008092 - cytoskeletal protein binding [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006897 - endocytosis [Evidence IEA]; GO:0045806 - negative regulation of endocytosis [Evidence IDA]; GO:0007165 - signal transduction [Evidence TAS] codon_start : 1 note : Syndapin I product : protein kinase C and casein kinase substrate in neurons 1 protein_id : NP_848142.1

name	Spdef (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305415 CCDS:CCDS28568.1 GeneID:30051 MGI:1353422
definition	GO_function : GO:0043565 - sequence-specific DNA binding [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : prostate specific ets transcription factor product : SAM pointed domain containing ets transcription factor protein_id : NP_038919.1

name	LOC100042744 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268637 GeneID:100042744
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478787.1

name	D17Wsu92e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113461986 GeneID:224647 MGI:106281
definition	codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : hypothetical protein LOC224647 isoform 2 protein_id : NP_001038184.1

name	D17Wsu92e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113461984 CCDS:CCDS28569.1 GeneID:224647 MGI:106281
definition	codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : hypothetical protein LOC224647 isoform 1 protein_id : NP_001028451.2

name	Snrpc (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755596 CCDS:CCDS28570.1 GeneID:20630 MGI:109489
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : U1 small nuclear ribonucleoprotein 1C protein_id : NP_035562.1

name	F830021D11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124107591 GeneID:224648 MGI:3041238
definition	codon_start : 1 product : hypothetical protein LOC224648 protein_id : NP_001074238.1

name	Taf11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30794436 CCDS:CCDS28571.1 GeneID:68776 MGI:1916026
definition	GO_component : GO:0005669 - transcription factor TFIID complex [Evidence ISS] GO_function : GO:0005515 - protein binding [Evidence IPI]; GO:0003702 - RNA polymerase II transcription factor activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 product : TAF11 RNA polymerase II, TATA box binding protein (TBP)-associated factor protein_id : NP_081112.1

name	Anks1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31088892 GeneID:224650 MGI:2446180
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : Odin product : ankyrin repeat and sterile alpha motif domain containing 1 protein_id : NP_852078.1

name	Tcp11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7305563 GeneID:21463 MGI:98544
definition	GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007283 - spermatogenesis [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : t-complex protein 11 protein_id : NP_038715.1

name	Scube3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:52138546 GeneID:268935 MGI:3045253
definition	GO_component : GO:0048222 - glycoprotein network [Evidence ISS] GO_function : GO:0005509 - calcium ion binding [Evidence IEA] GO_process : GO:0051291 - protein heterooligomerization [Evidence ISS]; GO:0051260 - protein homooligomerization [Evidence ISS] codon_start : 1 product : signal peptide, CUB and EGF-like domain containing protein 3 protein_id : NP_001004366.1

name	LOC100042764 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149268639 GeneID:100042764
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478827.1

name	Zfp523 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369882 CCDS:CCDS28573.1 GeneID:224656 MGI:2687278
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : zinc finger protein 523 protein_id : NP_766205.1

name	Def6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27734752 CCDS:CCDS28574.1 GeneID:23853 MGI:1346328
definition	codon_start : 1 exception : mismatches in translation note : SWAP-70-like adapter of T-cells; IRF-4-binding protein product : differentially expressed in FDCP 6 protein_id : NP_081461.1

name	1810013A23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149268707 GeneID:69050 MGI:1916300
definition	codon_start : 1 product : hypothetical protein LOC69050 protein_id : XP_001480229.1

name	Ppard (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33859590 CCDS:CCDS28575.1 GeneID:19015 MGI:101884
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IDA]; GO:0008047 - enzyme activator activity [Evidence TAS]; GO:0004879 - ligand-dependent nuclear receptor activity [Evidence TAS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016501 - prostacyclin receptor activity [Evidence TAS]; GO:0046982 - protein heterodimerization activity [Evidence TAS]; GO:0004872 - receptor activity [Evidence IEA]; GO:0046965 - retinoid X receptor binding [Evidence TAS]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003707 - steroid hormone receptor activity [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0042640 - anagen [Evidence IMP]; GO:0008366 - axon ensheathment [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IDA] [Evidence IMP]; GO:0008283 - cell proliferation [Evidence IMP]; GO:0050875 - cellular physiological process [Evidence TAS]; GO:0007566 - embryo implantation [Evidence TAS]; GO:0008544 - epidermis development [Evidence TAS]; GO:0006635 - fatty acid beta-oxidation [Evidence IEP]; GO:0015908 - fatty acid transport [Evidence IEP]; GO:0006629 - lipid metabolism [Evidence IMP]; GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0014068 - positive regulation of phosphoinositide 3-kinase cascade [Evidence IDA]; GO:0050796 - regulation of insulin secretion [Evidence NAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : mPPAR(delta); PPARdelta/beta; Peroxisome proliferator-activated receptor beta product : peroxisome proliferator activator receptor delta protein_id : NP_035275.1

name	Fance (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94401851 GeneID:72775 MGI:1920025
definition	codon_start : 1 product : Fanconi anemia, complementation group E protein_id : XP_991432.1

name	Rpl10a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6755350 CCDS:CCDS28576.1 GeneID:19896 MGI:1343877
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0030529 - ribonucleoprotein complex [Evidence IEA]; GO:0005840 - ribosome [Evidence IEA] GO_function : GO:0003735 - structural constituent of ribosome [Evidence IEA] GO_process : GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : ribospsmal protein L10A product : ribosomal protein L10A protein_id : NP_035417.1

name	Tead3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:117414172 CCDS:CCDS28577.1 GeneID:21678 MGI:109241
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IGI] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA]; GO:0016563 - transcriptional activator activity [Evidence IGI] GO_process : GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IGI]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : TEA domain family member 3 isoform 1 protein_id : NP_035696.2

name	Tulp1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:33468973 CCDS:CCDS28578.1 GeneID:22157 MGI:109571
definition	GO_function : GO:0008020 - G-protein coupled photoreceptor activity [Evidence IMP] GO_process : GO:0007602 - phototransduction [Evidence IMP]; GO:0050896 - response to stimulus [Evidence IEA]; GO:0007601 - visual perception [Evidence IEA] codon_start : 1 note : tubby like protein 1 like product : tubby like protein 1 protein_id : NP_067453.1

name	Fkbp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753884 GeneID:14229 MGI:104670
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016853 - isomerase activity [Evidence IEA]; GO:0003755 - peptidyl-prolyl cis-trans isomerase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0006457 - protein folding [Evidence IEA] codon_start : 1 note : FK506 binding protein 5 (51 kDa) product : FK506 binding protein 5 protein_id : NP_034350.1

name	4930511I11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13385786 CCDS:CCDS28579.1 GeneID:67645 MGI:1914895
definition	GO_function : GO:0005488 - binding [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC67645 protein_id : NP_080566.1

name	Gm749 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:85702211 GeneID:328788 MGI:2685595
definition	GO_component : GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008047 - enzyme activator activity [Evidence IEA] GO_process : GO:0007586 - digestion [Evidence IEA]; GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 product : hypothetical protein LOC328788 protein_id : NP_001030043.1

name	Clps (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:13384886 CCDS:CCDS28581.1 GeneID:109791 MGI:88421
definition	GO_process : GO:0007586 - digestion [Evidence IEA]; GO:0016042 - lipid catabolism [Evidence IEA] codon_start : 1 product : colipase, pancreatic protein_id : NP_079745.1

name	Tmhs (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311921 GeneID:328789 MGI:1915382
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA] GO_process : GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0007605 - sensory perception of sound [Evidence IMP] codon_start : 1 exception : unclassified translation discrepancy product : lipoma HMGIC fusion partner-like 5 protein_id : NP_080847.1

name	Srpk1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31982726 GeneID:20815 MGI:106908
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA] [Evidence IDA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IDA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA] [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA] [Evidence ISS]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IDA]; GO:0007243 - protein kinase cascade [Evidence IDA]; GO:0050684 - regulation of mRNA processing [Evidence IDA] codon_start : 1 note : SR protein-specific kinase 1 product : serine/arginine-rich protein specific kinase 1 protein_id : NP_058075.2

name	LOC677010 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149268703 GeneID:677010
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 597 ESTs, 3 Proteins product : similar to ribosomal protein L30 pseudo : _no_value transcript_id : XR_034529.1

name	EG666682 (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94401830 GeneID:666682 MGI:3644037
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 164 ESTs, 3 Proteins product : predicted gene, EG666682 pseudo : _no_value transcript_id : XR_002050.1

name	4930526A20Rik (CDS detail)
type	misc_RNA
link	vega ensembl MGI NCBI
xref	GI:94401833 GeneID:622485 MGI:3612449
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 28 mRNAs, 158 ESTs, 3 Proteins product : RIKEN cDNA 4930526A20 gene transcript_id : XR_001613.1

clone name	MSMg01-124D02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-381F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-272G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-124C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-474A21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303L05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-360A01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-146M19
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-269D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-264I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445D14
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-092I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-400F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235G04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-306N01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-470L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518E03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455C08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-110O18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352J14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336P15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-101N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051A15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-236A11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-336A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-297O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-453L04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-306L13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-307L12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-347G07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362L13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518J16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338A14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518J16
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-202M21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129O21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079D10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-076L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394G09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-527I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-088D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-458O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333F09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-531I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332K02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-378I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-496P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142I06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295B12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-468G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403O01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-179G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-068J19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-305J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-353A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373H02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313L13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-177P20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-244G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-054A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206L16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109M15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170A14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336E23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-184J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150A07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291J21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-248A01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318P04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326J02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155O24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178K11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306F18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-166H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-317B20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-248N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106M06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-118I04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132D10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026G03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-278E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-255B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-336B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-043J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215I19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313A23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-335J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-031C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271K02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234H16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-045J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-070G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-291F11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245I18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106F13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-197F24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225P08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H06
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-347G07.T7 (MSMg01no347_g07.b1)	MSMg01-347G07.TJ (MSMg01no347_g07.g1)
ACC	AG459745	AG459746
length	988	792
length of high quality (start - end)	---	440 (74 - 513)
definition	CHROMAT_FILE: MSMg01no347_g07.b1 PHD_FILE: MSMg01no347_g07.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:38:21 2005	CHROMAT_FILE: MSMg01no347_g07.g1 PHD_FILE: MSMg01no347_g07.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 22:38:21 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	GTCATTTACTTTGTTCCTCTTGCGGGANGGGGTAGAGAGGGACTCATCTA TTCCAAACACGAGGAAGGGCGNNGGGAANNNCNNANNAGTACCAGTTGAG CGCAGCAGGGGGGGACAGCACGACACANCACGAGCACACAGCANCACAGC ACCACGCCTTTTTTTGTCCGCACTGAGAGGGTGCATCTGCCGTTTGAGTA TCACAGCTAGCTCTCGGGGAGTACAGCATGTGCAGGCGAGGAGTCTGTCT TTCGATGCTGCTAGTGACCACCCTGTGTGTCTCAGCCGTACTCCGTACTC GCAGCCATAGGCGCCGCCCATACTGTGTAGGCGCTACCCCAAGCGTCATC TTTTCTGGTAGAGCGTGCGCTCGTGTATTACGGTCCACAGCCGGTTGGAG GCTCAATGTATCGCTAGTCGGCCTCGATCCGCGATTTCCCTTTTCTTTTT GTGCGCTATCCCTCATATGCGCGTCGATTTCGCGGATCGGGTGTGATCTA TCCCCCCCCCCCTCCGCGGATATTAGTAGCGTGTTCACCAGCGCTCCTTG TGCTTGATTCAGTCGCAGCCCTCTCCCCCCACCTCCCTACTTCTCTAGTA CTCTCCTCTGTTCCTAACCTTTCTTCTTATCTACTTCGCCTCCCTCCCAC CTTTGTTTCCACTTCACGTCCTCTGCCGCCTCTCCTCTTGGCTTTTCCTC TTACTTCTCACCTTGCCCGCTAATAGCCCCTCTGACTCCCTGCGTCTTTT CCCTCCCCCTAGCTTGTTGTCCCCTTTTGTTCCTGCCCTCCCCCTTCTTA TCCCTTCTACTTTTTTCTCTTCCCCTTTTTTTGGCGGCTTTGTTTTTATA CTTGACCCTTATTCCCCCTTTAGCCCTCCTTTACCCTCTTCCCTTTTACC TTGCCACCCCTCCGCCCACTCATCTTTGTACTTTTTATTCCCGCCTCCCC TTTCGTCGTCCCGCGTTTCCCTGTTTTTTTTTCTCCTG	AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXCAGGCCAGGAGAGACCTTGTGCTGTTG TTGGTTTTTTTTCCCCCAAAAAAGTAGGCTAGAGAGATGGCTTAGTGAAT AAACTATGTACCACACAATTTGGAATCCAAGAACCCACATTTAAAAAGTT ACATGGGGGCTGGAGAGATGGCTCAGCGATTAGGAGCACTGACTGCTCTT CCAGAGGTCCTGAGTTCAAATCCCAGCAACCACAGGTGGCTCACAACCAT CTGTAATGGGATCCGACGCCTCTACATGCAGCTAGAGCAGTCACACATAA AGCCAACAAGTCTTAGTAGCGGGCATCTGTAACCCACCGGGTGTACAGTA AGATGAGGCCTAAGCAGGAGAATCCCGGAAACTGGTCGGCCAGGAAGCCT GGTGTGGGCATGCTCAGCAAGAGAGCCTGCCTGTACACAAAGTGCACGGC GAGGAAGGACACCCTGAGGATGGTCATTCGGGTAGGGAGTCACTGAGCCC TCTCGGTTAAGCTTCTGTCAGCTCTACCAGAGGAACTTCCTTCCACAGTG TATATATGGTTGCCCTACATCTCTGAAGGTCCATCGTCCTGATTTCACAT GTTTTTTTGTTGAGGCTTGCTTACTCTTCCTTCCATGGACCCTACTTTTG TTCACCACAATTCGTTTTATCCGCCTTTCCCCTCTATTTTACCCTCCCTT CCCCCAATAATTAAATACTTGTTAGACATATTCCTATTCCAT
quality values	Open. Hide. 8 10 8 8 8 10 8 8 8 8 8 10 8 8 8 8 6 6 6 8 17 11 15 11 11 11 3 0 3 9 6 6 6 6 6 6 8 8 8 9 21 21 22 19 8 8 7 9 9 9 9 10 10 9 7 7 7 7 7 7 7 8 13 6 6 6 6 6 6 12 3 0 0 3 8 8 8 3 0 0 0 3 0 0 3 0 0 3 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 6 8 9 11 9 9 9 6 10 6 6 8 10 6 6 6 11 15 15 3 0 3 13 6 6 6 6 6 6 6 9 9 9 9 9 3 0 3 13 12 8 8 8 8 8 8 8 8 8 8 8 13 11 16 18 9 8 7 6 6 8 6 7 7 6 6 6 8 8 8 8 8 8 8 9 8 10 13 13 9 8 10 11 8 8 6 10 8 7 7 8 9 9 9 9 10 10 9 9 8 11 8 8 8 8 6 6 6 8 8 11 9 10 9 9 13 8 8 8 8 8 7 8 6 6 8 8 8 8 6 8 6 6 10 6 6 6 8 8 8 10 8 9 13 9 9 12 7 8 8 8 8 8 8 10 10 6 6 6 6 8 6 8 8 12 10 9 8 11 10 11 10 9 9 7 8 10 10 10 8 13 10 10 8 8 8 8 9 9 10 10 10 10 10 8 8 8 10 10 8 8 8 8 8 8 8 10 8 8 8 8 11 11 11 8 8 8 8 8 8 6 6 6 8 8 6 6 6 6 9 12 11 10 8 8 8 8 9 9 9 9 9 11 11 11 11 10 10 6 6 6 6 11 10 10 8 9 9 11 9 9 8 6 8 8 8 6 6 6 6 6 10 10 9 9 8 8 8 8 6 6 8 8 8 8 8 6 7 8 6 10 13 13 13 11 11 9 9 9 9 11 11 17 11 8 8 8 8 8 8 8 8 8 9 10 8 8 8 8 8 6 6 6 6 8 8 9 9 9 9 6 8 7 7 7 7 7 7 7 8 8 8 8 6 6 6 6 6 6 8 8 8 8 9 8 8 8 6 6 6 8 10 10 8 8 8 8 9 9 10 10 10 13 10 10 10 10 9 9 11 11 10 8 10 8 8 8 8 8 8 10 8 8 10 12 18 19 18 22 18 20 22 19 9 8 7 7 7 7 10 8 11 11 9 8 8 8 8 6 6 6 6 8 8 10 10 9 10 9 6 6 6 6 8 8 10 8 9 10 10 10 10 8 8 8 8 8 8 8 8 8 8 8 9 10 10 8 8 8 8 8 8 11 10 10 10 10 10 11 12 9 9 8 8 8 10 13 10 8 8 8 8 8 9 9 10 9 9 9 6 8 6 7 8 10 9 8 8 7 7 11 10 10 12 13 12 8 9 9 9 12 15 15 12 9 8 8 8 10 8 8 8 8 8 8 6 6 10 10 8 6 8 8 17 17 12 12 9 7 10 8 9 9 9 8 8 8 10 10 12 18 8 8 7 6 8 8 9 9 10 10 10 10 10 10 13 11 8 6 6 6 8 10 10 10 10 10 8 8 8 8 6 6 6 6 8 8 12 10 10 8 7 6 8 8 11 11 15 12 12 11 10 10 10 8 8 6 6 8 8 8 8 9 9 10 9 9 9 8 10 9 9 9 13 10 8 7 7 7 7 8 8 8 8 8 8 8 8 6 6 8 8 14 8 8 6 6 8 8 8 8 8 8 8 8 8 6 7 6 8 8 9 9 10 9 6 7 7 9 9 8 7 6 10 11 8 10 10 13 10 8 9 13 13 18 18 18 18 10 10 10 10 10 10 14 15 15 14 9 8 8 8 8 8 8 8 8 10 8 8 8 8 10 13 8 8 8 8 8 10 10 17 12 10 8 8 8 8 8 8 8 8 8 6 7 8 10 10 10 10 10 9 9 9 8 8 6 6 7 12 8 8 8 8 8 8 14 16 13 15 10 10 10 6 8 6 6 14 15 10 10 9 12 12 10 11 8 11 7 6 8 8 10 10 15 15 19 15 10 10 10 10 12 10 8 8 6 6 7 6 7 7 16 18 12 9 9 9 14 9 10 10 15 8 8 6 6 8 8 8 8 8 8 8 8 11 15 10 8 8 8 11 8 8 6 6 6 11 7 8 13 8 10 12 9 8 8 8 8 6 6 6 8 8 10 6 6 7 7 10 7 9 8 8 8 8 9 10 10 11 12 11 11 10 10 10 9 9 10 9 9	Open. Hide. 10 10 10 9 11 10 10 20 16 17 19 23 28 22 30 31 32 39 39 39 37 37 35 31 28 39 39 37 29 23 13 9 9 11 13 11 10 10 10 17 21 37 33 39 47 37 47 47 39 39 47 47 57 57 57 59 43 27 17 10 12 10 11 14 16 16 20 14 26 26 26 41 42 42 42 47 50 54 68 51 51 51 50 50 48 51 50 50 50 50 59 68 68 68 59 59 59 59 59 59 68 68 68 68 68 68 68 68 68 68 68 68 68 59 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 57 59 57 57 57 48 48 41 41 41 46 57 57 59 57 57 57 50 50 50 50 50 50 57 57 57 57 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 57 57 52 52 57 57 57 57 57 57 57 57 57 57 57 59 59 68 68 59 57 43 38 22 22 22 43 43 52 57 57 57 57 59 62 68 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 52 62 62 68 68 68 68 68 68 62 62 62 62 62 62 62 68 68 62 62 62 62 62 62 62 62 52 52 52 62 62 68 68 68 68 62 62 62 62 62 62 59 59 57 57 52 57 57 57 57 57 68 57 57 57 52 43 43 52 52 43 43 39 52 52 57 57 57 57 57 59 59 57 57 57 57 57 57 57 57 59 59 59 59 59 59 59 57 57 57 57 52 54 54 57 57 52 52 52 52 50 59 43 43 43 43 43 43 43 38 38 43 50 44 50 52 43 37 43 43 46 50 50 57 57 57 59 57 57 57 57 57 57 57 47 47 47 47 47 44 47 43 42 42 37 35 35 42 44 43 43 42 42 37 42 42 28 28 28 32 37 43 46 46 48 57 48 48 48 43 37 29 28 28 31 41 42 42 37 39 35 35 39 39 39 36 36 42 42 33 23 23 24 24 20 29 28 28 34 43 39 32 32 22 22 22 23 28 28 23 25 25 25 29 32 34 34 28 28 24 20 19 19 19 25 28 28 28 28 28 22 28 22 28 22 21 12 12 12 18 18 19 22 22 23 29 29 20 20 19 23 23 19 21 15 15 13 18 17 17 14 14 14 28 28 28 15 10 8 8 8 8 10 13 11 11 11 16 11 18 19 20 20 11 11 17 12 13 15 21 20 13 8 8 8 8 10 22 15 13 18 19 14 14 14 21 18 20 15 15 18 18 19 16 15 15 12 12 11 9 8 8 8 8 8 10 9 10 10 14 12 12 10 8 8 8 8 8 8 8 8 9 9 10 12 11 11 19 10 10 9 8 10 8 8 8 8 10 9 8 8 8 8 8 8 8 8 11 10 8 10 10 8 8 9 8 8 11 10 10 10 15 13 12 8 8 8 8 10 10 14 13 16 13 13 10 11 12 8 6 6 8 8 12 10 10 7 7 8 8 12 14 19 10 10 10 8 8 8 8 8 8 6 6 8 8 8 13 10 10 10 10 10 11 12 10 9 9 9 10 10 10 8 8 8 8 8 8 7 7 8 10 9 14 17 10 8 8 8 8 8 8 10 8 10 10 11 11 10 10 9 9 9 9 9 11 11 12 10 10 10 13 13 8 8 8 9 13 13 18 16 13 10 8 8 6 6 8 8 8 8 8 10 10 10 10 10 10 12 10 9 9 9 8 8 8 8 8 8 8 8 10 10 9 9 10 10 10 10 10

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no347_g07.g1 MSMg01no347_g07.g1 CHROMAT_FILE:
MSMg01no347_g07.g1 PHD_FILE: MSMg01no347_g07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:38:21 2005
         (440 letters)



>mm_chr17_27744631_27745470
          Length = 840

 Score =  812 bits (420), Expect = 0.0
 Identities = 435/440 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   caggccaggagagaccttgtgctgttgttggttttttttcccccaaaaaagtaggctaga 60
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 201 caggccaggagagaccttgtgctgttgttgtttttttttcccccaaaaaagtaggctaga 260

                                                                       
Query: 61  gagatggcttagtgaataaactatgtaccacacaatttggaatccaagaacccacattta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gagatggcttagtgaataaactatgtaccacacaatttggaatccaagaacccacattta 320

                                                                       
Query: 121 aaaagttacatgggggctggagagatggctcagcgattaggagcactgactgctcttcca 180
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 321 aaaagttacatgggggctggagagatggctcagcgattgggagcactgactgctcttcca 380

                                                                       
Query: 181 gaggtcctgagttcaaatcccagcaaccacaggtggctcacaaccatctgtaatgggatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gaggtcctgagttcaaatcccagcaaccacaggtggctcacaaccatctgtaatgggatc 440

                                                                       
Query: 241 cgacgcctctacatgcagctagagcagtcacacataaagccaacaagtcttagtagcggg 300
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 441 cgacgcctctacatgcagctagagcagtcacacataaaaccaacaagtcttagtagcggg 500

                                                                       
Query: 301 catctgtaacccaccgggtgtacagtaagatgaggcctaagcaggagaatcccggaaact 360
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 catctgtaacccaccaggtgtacagtaagatgaggcctaagcaggagaatcccggaaact 560

                                                                       
Query: 361 ggtcggccaggaagcctggtgtgggcatgctcagcaagagagcctgcctgtacacaaagt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ggtcggccaggaagcctggtgtgggcatgctcagcaagagagcctgcctgtacacaaagt 620

                               
Query: 421 gcacggcgaggaaggacacc 440
           |||||| |||||||||||||
Sbjct: 621 gcacggggaggaaggacacc 640


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 440
Length of database: 840
Length adjustment: 9
Effective length of query: 431
Effective length of database: 831
Effective search space:   358161
Effective search space used:   358161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information