GGGGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XCGCGGAATTCTCAGTTCTGTGTGTGCTGTTTTTGTACATCTAAAACTTT
TCTAAAACAGTATTTAAAGCAAAACAAGTGACTTAAGCATGGCATTGAAT
AAAGCTCATAAAGTCAACTGAGATAGGATATGGGAGCTGGGATAGGCTAG
TGGGATGGGTAAAAGTGCCTGTCAGGAGGCTACCCACCAACCCTGCTTGG
AAGGATCGCACTTCTTTCCAAGATTGAGAGATCATGACATGGATACACTA
AGGGCAATAGATAGACTGATGGGTGCTTGGAAATAGCACTAGATCTACAT
TGTGCAATCTGAGAACTAGTAAAACACAGAGGAGTAGGAGAGTCTCACAC
AAGTACTGATGCCCCCCACCACCACCAACACAGTCAGAATAGAGTGACAT
GAGATTGAAAAGTGGTTTAGTATTTCATTTACAAAATACTTAGTTGTAAA
GGATGGGAAGGAAGCTATAGAGAATAGTGTTCTGAAGACAAAAGAAAAGA
TTGCTTCAGGTTGGGGAGATGGCTCAGTGGGTACAATGTGTGCTGTACAA
ACATAAACACCAAGGTCAGATCTCCAGCCCCCACATAAGTCAAGCATGGC
TGTGTGTGACCGTAAAGCAAGGGCTGAGATAGGTCAGGGGATAAGGGGAC
CCATTGGCTGCCAGAATCACTGAAAAATGGTGAGCTCTAAGTT

NCCCCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAA
TGGCAGAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAA
ATGCAAATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGC
TAAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAA
GAGGAACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTC
TGGAAATCAGTCTGGCAGTTCCTCAGAAAACTGGACATAGTACTACCGGA
GGATCCAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTG
GTAAGAAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATA
GCCAGAAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACA
GAAAATGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGA
ATGAATTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATC
CTGAGTGAGGTAACACATTCACAAAGAAACTCACACAATATGTATTCACT
GGTAAGTGGATATTAGCCCCCAACCTAGGATATCCGAGATATAAGATATA
TTTTGCTAAACACTTGTAATTCTAGAAGAATGAAGACTGGAGTGG

Query= MSMg01no353_e02.b1 MSMg01no353_e02.b1 CHROMAT_FILE:
MSMg01no353_e02.b1 PHD_FILE: MSMg01no353_e02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:04 2005
         (688 letters)



>mm_chr17_89765799_89766884
          Length = 1086

 Score = 1185 bits (613), Expect = 0.0
 Identities = 668/687 (97%), Gaps = 4/687 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctcagttctgtgtgtgctgtttttgtacatctaaaacttttctaaaacagtatt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctcagttctgtgtgtgctgtttttgtacatctaaaacttttctaaaacagtatt 263

                                                                       
Query: 64  taaagcaaaacaagtgacttaagcatggcattgaataaagctcataaagtcaactgagat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 taaagcaaaacaagtgacttaagcatggcattgaataaagctcataaagtcaactgagat 323

                                                                       
Query: 124 aggatatgggagctgggataggctagtgggatgggtaaaagtgcctgtcaggaggctacc 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aggatatgggagctgggataggctagtgggatgggtaaaagtgcctgtcaggaggctacc 383

                                                                       
Query: 184 caccaaccctgcttggaaggatcgcacttctttccaagattgagagatcatgacatggat 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 caccaaccctgcttggaaggatcgcacttctttccaagattgagagatcatgacatggat 443

                                                                       
Query: 244 acactaagggcaatagatagactgatgggtgcttggaaatagcactagatctacattgtg 303
           |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 444 acactaagggcaatagatagactgatgggtgcttggaaatagcactggatctacattgtg 503

                                                                       
Query: 304 caatctgagaactagtaaaacacagaggagtaggagagtctcacacaagtactgatgccc 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 caatctgagaactagtaaaacacagaggagtaggagagtctcacacaagtactgatgccc 563

                                                                       
Query: 364 cccaccaccaccaacacagtcagaatagagtgacatgagattgaaaagtggtttagtatt 423
           ||| || |||  ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 564 cccccc-ccaa-aacacagtcagaatagagtgacatgagattgaaaaatggtttagtatt 621

                                                                       
Query: 424 tcatttacaaaatacttagttgtaaaggatgggaaggaagctatagagaatagtgttctg 483
           ||||||||||||||||||| ||||||||||||||| |||||||||||||| |||||||||
Sbjct: 622 tcatttacaaaatacttagctgtaaaggatgggaaagaagctatagagaacagtgttctg 681

                                                                       
Query: 484 aagacaaaagaaaagattgcttcaggttggggagatggctcagtgggtacaatgtgtg-- 541
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||  
Sbjct: 682 aagacaaaagaaaagactgcttcaggttggggagatggctcagtgggtacaatgtgtgtg 741

                                                                       
Query: 542 ctgtacaaacataaacaccaaggtcagatctccagcccccacataagtcaagcatggctg 601
           |||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||
Sbjct: 742 ctgtacaaacataaacaccaagctcagatctccagcccccacataagtcaatcgtggctg 801

                                                                       
Query: 602 tgtgtgaccgtaaagcaagggctgagataggtcaggggataaggggacccattggctgcc 661
           ||||||| | ||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 tgtgtgagcttaaagcaagagctgagataggtcaggggataaggggacccattggctgcc 861

                                      
Query: 662 agaatcactgaaaaatggtgagctcta 688
            ||||||||||||||||||||||||||
Sbjct: 862 tgaatcactgaaaaatggtgagctcta 888


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 688
Length of database: 1086
Length adjustment: 10
Effective length of query: 678
Effective length of database: 1076
Effective search space:   729528
Effective search space used:   729528
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)