NCCTCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCACCAAGTGACTTAGAAATAGTAGTAAACTTAACAGATTTCAC
ACAGGCTAATACAGAGTAAATTCAACATTCCTAAGACAGTTATTTTACTC
ATTTCACACAGAAACAAAAACCTACTGAAAGCATGCCATACTGCACAATG
ATCCACACATAGGTACAAATGATGAATGTAACAGGAGGCTTTGTAAGGGC
AGATCCTGACGATAGTGATTGACAAGCCCAGTGGGATTGATTCTTAAAAG
AAAGACAATGGTATATAAAACTCTTTTTAAAAAAAAAAAGGTAATGTAAT
AGGGTTAGCATTCCTCAAATACGGTTTAGCTAGTTATTAGCTGATGACAT
TCTGGGCAGCTCAAGGTGTCATATCTTCTCCAGGGTCAGAAGTAGGATTC
CTGTTCCATTTCTTATATCAGTAATTTGAGTACTGTAGTCCCTGTTACAT
TTTTCCAATGTAGTTATGTTCAGGGATAGACCCAACCATAATGACCTGAA
ATCTTGTTATTGTCTACCTAGTTGGCTAACAAATACACATAGCCTAAGAA
GGACATAAACAGCAGAGGACACACAGGATACAGAAATAGGAAGTTTCTTA
ACTACAGAGAAAGTTAGAAGAAGTAATTTGCCACTTTTTTTAAAAACCAA
TTGGGAGGAAAAAACAAACAGTGATTTAATTTCTGAAAAATAGTACCAAA
AGGCAT

TTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAATGGCA
GAGAAGCACTTGAAAAAATGTTCAACATCCTTAATCATCAGGGAAATGCA
AATCAAAACAACCCTGAGATTCCACCTCACACCAGTCAGAATGGCTAAGA
TCAAAAAATCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAGAGGA
ACACTCCTCCATTGTTGGTGGGAGTGCAGGCTTGTACAACCACTCTGGAA
ATCAGTCTGGCGGTTCCTCATATTTTTGGATATAGTACTACCGGAGGATC
CAGCAATACCTCTCCTGGGCATATATCCAGAAGATGCCCCAACTGGTAAG
AAGGACACATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAG
AAGCTGGAAAGAACCTAGATGCCCCTCAACAGAGGAATGGATACAGAAAA
TGTGGTACATCTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAA
TTTATGAAATTCCTAGCCAAATGGATGGACCTGGAGGGCATCATCCTGAG
TGAGGGAACACATTCTCAAAGAAACTCACCCAATAAGTATTCCCTGACAA
GTGGATATTATTCCCATACCTTGGATACCCACGATATATGACCTTATTTG
TTACCTCCCCGAAACTCTTCACAAATCGAAAACTGAAGTGTGGGAACCTA
TGCCCTCCCTCCATTC

Query= MSMg01no353_g14.b1 MSMg01no353_g14.b1 CHROMAT_FILE:
MSMg01no353_g14.b1 PHD_FILE: MSMg01no353_g14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:46:17 2005
         (576 letters)



>mm_chr17_41868094_41869073
          Length = 980

 Score = 1071 bits (554), Expect = 0.0
 Identities = 572/580 (98%), Gaps = 4/580 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   tagtagtaaacttaacagatttcacacaggctaatacagagtaaattcaacattcctaag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 780 tagtagtaaacttaacagatttcacacaggctaatacagagtaaattcaacattcctaag 721

                                                                       
Query: 61  acagttattttactcatttcacacagaaacaaaaacctactgaaagcatgccatactgca 120
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 720 acagttcttttactcatttcacacagaaacaaaaacctactgaaagcatgccatactgca 661

                                                                       
Query: 121 caatgatccacacataggtacaaatgatgaatgtaacaggaggctttgtaagggcagatc 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 caatgatccacacataggtacaaatgatgaatgtaacaggaggctttgtaagggcagatc 601

                                                                       
Query: 181 ctgacgatagtgattgacaagcccagtgggattgattcttaaaagaaagacaatggtata 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 ctgacgatagtgattgacaagcccagtgggattgattcttaaaagaaagacaatggtata 541

                                                                       
Query: 241 taaaactcttttt----aaaaaaaaaaaggtaatgtaatagggttagcattcctcaaata 296
           ||||||||| |||    |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 taaaactctctttaaaaaaaaaaaaaaaggtaatgtaatagggttagcattcctcaaata 481

                                                                       
Query: 297 cggtttagctagttattagctgatgacattctgggcagctcaaggtgtcatatcttctcc 356
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 cggtttagctagttagtagctgatgacattctgggcagctcaaggtgtcatatcttctcc 421

                                                                       
Query: 357 agggtcagaagtaggattcctgttccatttcttatatcagtaatttgagtactgtagtcc 416
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 420 agggtcagaagtaggattcctgttccatttcttatatcagtaatttgagtactgtagtac 361

                                                                       
Query: 417 ctgttacatttttccaatgtagttatgttcagggatagacccaaccataatgacctgaaa 476
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 ctgttacatttttccaatgtagttatgttcagggatagacccaaccataatgacctgaaa 301

                                                                       
Query: 477 tcttgttattgtctacctagttggctaacaaatacacatagcctaagaaggacataaaca 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 tcttgttattgtctacctagttggctaacaaatacacatagcctaagaaggacataaaca 241

                                                   
Query: 537 gcagaggacacacaggatacagaaataggaagtttcttaa 576
           ||||||||||||||||||||||||||||||||||||||||
Sbjct: 240 gcagaggacacacaggatacagaaataggaagtttcttaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 576
Length of database: 980
Length adjustment: 10
Effective length of query: 566
Effective length of database: 970
Effective search space:   549020
Effective search space used:   549020
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)