Query= MSMg01no356_e24.b1 MSMg01no356_e24.b1 CHROMAT_FILE:
MSMg01no356_e24.b1 PHD_FILE: MSMg01no356_e24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:00 2005
(454 letters)
>mm_chr17_90653803_90654656
Length = 854
Score = 806 bits (417), Expect = 0.0
Identities = 453/479 (94%), Gaps = 25/479 (5%)
Strand = Plus / Minus
Query: 1 acagcctaggcaatttctctatagcatcaaaatgaccccttttattgttattatttttaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 acagcctaggcaatttctctatagcatcaaaatgaccccttttattgttattatttttaa 430
Query: 61 cctttatagaggagtcaacattaccattaccaaggcacatccttatcttagcatagtcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 cctttatagaggagtcaacattaccattaccaaggcacatccttatcttagcatagtcca 370
Query: 121 acaggacctctgtgatttcagcatggaggttatagtgagtgccttttaaaacaatgatac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 acaggacctctgtgatttcagcatggaggttatagtgagtgccttttaaaacaatgatac 310
Query: 181 tctcatcaccttactctccagattccttcccatgacttcatgaaagagcacatttgttga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 tctcatcaccttactctccagattccttcccatgacttcatgaaagagcacatttgttga 250
Query: 241 taaattaagtttttttttaagttgacaattatttctcattctgggtaattatatatatat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 taaattaagtttttttttaagttgacaattatttctcattctgggtaattatatatatat 190
Query: 301 atatata---------------------aaata-at--aatat-atataatataagtatt 335
||||||| | ||| || ||||| ||||||||||||||||
Sbjct: 189 atatatatatatatatatatatatatatatatatataaaatataatataatataagtatt 130
Query: 336 atattttaatgtgatatttctatataaactggattttattttctttacaaaagaaataca 395
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 atattttaatgtgatatttctatataaactggattttattttctttacaaaagaaataca 70
Query: 396 ttttaaatacatacaggtgtaaagctgcctacgtaacggacttttccacatttggcctc 454
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 69 ttttaaatacatacaggtgtaaagctgcctacgtaacggacttttccacatttggcctc 11
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 47
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no356_e24.g1 MSMg01no356_e24.g1 CHROMAT_FILE:
MSMg01no356_e24.g1 PHD_FILE: MSMg01no356_e24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:50:00 2005
(402 letters)
>mm_chr17_90475808_90476605
Length = 798
Score = 725 bits (375), Expect = 0.0
Identities = 395/403 (98%), Gaps = 6/403 (1%)
Strand = Plus / Plus
Query: 1 attgagtctaaaccacatgctacttgaagtaatcattggtttattgtccttatagttttg 60
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 201 attgagtctaaaccacatgctatttgaagtaatcattggtttattgtccttatagttttg 260
Query: 61 agtatttgaccctgacttgaggtatagatattgtcacaggacatattattgctaatggta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtatttgaccctgacttgaggtatagatattgtcacaggacatattattgctaatggta 320
Query: 121 ccattttaaagccctgtttccctaatgtatccactatataaataagattaaggcataaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccattttaaagccctgtttccctaatgtatccactatataaataagattaaggcataaaa 380
Query: 181 gacaggagaaaaaaattaacaacaaaattgtatacttgatttgaaagaaaaaattggaat 240
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 gacaggagaaaaaaattaacaacaaaattgtatacttgatttgaaagaaaaa-ttggaat 439
Query: 241 act-gcaaatgaaatataactgaaaaaaaaaaggaacaaaaaccattacagaaaaaaacc 299
| | |||||||||||| |||||||||||| ||||||||||||||||||||||||||||
Sbjct: 440 a-tagcaaatgaaataaaactgaaaaaaa---ggaacaaaaaccattacagaaaaaaacc 495
Query: 300 attacagaaaaaaaccattacagaactgtcaaaattaacttcccaggctttatttctgac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 496 attacagaaaaaaaccattacagaactgtcaaaattaacttcccaggctttatttctgac 555
Query: 360 ttctagcctctggcttttgttatatcatgtaatttgactctgt 402
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 556 ttctagcctctggcttttgttatatcatgtaatttgactctgt 598
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 4
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 402
Length of database: 798
Length adjustment: 9
Effective length of query: 393
Effective length of database: 789
Effective search space: 310077
Effective search space used: 310077
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
