XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAGAA
TGGTAACTATGTTGAGATCATTTTATACTTGTAAGTAAACAGAAATGTTT
TACTGTCCCATAGTAAGACATATCCAGGATGTTTCACAGAAAAGGAGTCT
ATTCATGACCTTTGTCCTAGTCAAAGGTTTTCAACTTAGGTAACCAATCT
TCCTGCTAAATGGAAGACCTCAAATAAAATTCTGGCAATTTCTCTGTATC
ATTCTCTTCAGTGTTTACAACTTAACTTAAAAAAATTATAAACATTTTAG
GCTCCTGTTGAAACTGTAGAAATATTGTATATAGTTACATTCCATTGTAA
ATGGATTCGGTTTACAGTGTAGCACCAGACAGCCAGTATGTGCTACTTTT
TGTTAAAAAGACAAAATGACTACAATGTATCGTTCTTGGAGAGTGATACA
ATATGGTATTGCTGCTGTGTTCCAGAAGCCTATGGCATTCATTGGAATAG
CCAAGAGAAACACACTGATAATTTATACAGTTAGGATCATGATTTTACAA
GTGGATAACAGTGTCCTAAATAATAAATGAACTTAACTCTCTATACCCAA
CTAAGCCCTCGAAGATTCCAAGTTGCTTAAGACATGCTTATGATTTGAAG
GATTCCAGTCAAGCACCTTTCCCCTCCACTTTCTCTAATAGATTGGGGTA
AATCCTAATGTGGGTGCTTAA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXACCAAAGATAGGGAAAAGCAGAAAATGAAACTCT
AAATCCCAAGATTGGATCCCAAAAATATAAAATGTTTCCAACTCTCTGGG
GATACTATATTGGCACCTTAACCAGACTCCTATATTAAGGGAGTATTACA
GCTGAAAAAGACTCGCAGTCTGTTTACAGAGGAGTTTCTGGAGAAATGGA
AAACCAAGGAAACAATAAGGCTCCTGAGGGAGATTTTTAGCTTCTCACAT
TTCAAGCTATAGTAAAGATTAAGCACAGCATAGTCTTGCCGAAATGAGCA
AATAATTTCAGACTTGTGACCTCTTTGGCTTGATTTCTTTTGCTTCCTGT
GTTATCTGACTGTCAACTGAACATCGTGAGGAATGCTGTAAAGCTACCAA
CAACATCTGAAGAGACAAAGCATGCATGGAGACCAACAGAACTGGGCATT
AGCAGATCAGGATTTTAAAGCAATTGTGATGAATAAGCTAATGGCTTTAA
TGGAGCAGATAAGTGATTTAAACAGAGATGAAGACCCTAAGAAGTCCATC
TGCCAAGGATGTTATAAATACTAAAGCCTGTAGGGAGGAAATAGGTCACT
CCTTTAAAAGTTTGGGGGTACCCAAATTGGAGGGGACATTTCTCCTTCGA
CAAAAACCACCTATTTTTGCTTATG

Query= MSMg01no358_b08.b1 MSMg01no358_b08.b1 CHROMAT_FILE:
MSMg01no358_b08.b1 PHD_FILE: MSMg01no358_b08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:16 2005
         (563 letters)



>mm_chr17_91482062_91483024
          Length = 963

 Score = 1060 bits (548), Expect = 0.0
 Identities = 557/560 (99%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctagaatggtaactatgttgagatcattttatacttgtaagtaaacagaaatgt 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctagaatggtaactatgttgagatcattttatacttgtaagtaaacagaaatgt 263

                                                                       
Query: 64  tttactgtcccatagtaagacatatccaggatgtttcacagaaaaggagtctattcatga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttactgtcccatagtaagacatatccaggatgtttcacagaaaaggagtctattcatga 323

                                                                       
Query: 124 cctttgtcctagtcaaaggttttcaacttaggtaaccaatcttcctgctaaatggaagac 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 324 cctttgtcctagtcaaaggttttcaacttaggtaaccaatcttcctgctaaatggcagac 383

                                                                       
Query: 184 ctcaaataaaattctggcaatttctctgtatcattctcttcagtgtttacaacttaactt 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctcaaataaaattctggcaatttctctgtatcattctcttcagtgtttacaacttaactt 443

                                                                       
Query: 244 aaaaaaattataaacattttaggctcctgttgaaactgtagaaatattgtatatagttac 303
           |||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 444 aaaaaaattataaacattttaggctcctgttgaaactgtagaaatattatacatagttac 503

                                                                       
Query: 304 attccattgtaaatggattcggtttacagtgtagcaccagacagccagtatgtgctactt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 attccattgtaaatggattcggtttacagtgtagcaccagacagccagtatgtgctactt 563

                                                                       
Query: 364 tttgttaaaaagacaaaatgactacaatgtatcgttcttggagagtgatacaatatggta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 tttgttaaaaagacaaaatgactacaatgtatcgttcttggagagtgatacaatatggta 623

                                                                       
Query: 424 ttgctgctgtgttccagaagcctatggcattcattggaatagccaagagaaacacactga 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 ttgctgctgtgttccagaagcctatggcattcattggaatagccaagagaaacacactga 683

                                                                       
Query: 484 taatttatacagttaggatcatgattttacaagtggataacagtgtcctaaataataaat 543
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 684 taatttatacagttaggatcatgattttacaagtggataacagtgtcctaaataataaat 743

                               
Query: 544 gaacttaactctctataccc 563
           ||||||||||||||||||||
Sbjct: 744 gaacttaactctctataccc 763


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space:   527009
Effective search space used:   527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)