Query= MSMg01no358_f12.b1 MSMg01no358_f12.b1 CHROMAT_FILE:
MSMg01no358_f12.b1 PHD_FILE: MSMg01no358_f12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:35 2005
(478 letters)
>mm_chr17_14572379_14573255
Length = 877
Score = 890 bits (460), Expect = 0.0
Identities = 469/472 (99%), Gaps = 1/472 (0%)
Strand = Plus / Minus
Query: 5 gaattctctgacaactaggtagggatgtccactgtcctgggagaaccgtttccatcattc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 gaattctctgacaactaggtagggatgtccactgtcctgggagaaccgtttccatcattc 616
Query: 65 ttctgcattcaatgaggtttttgaaggggattgtgtttgaacccactccaccctcctccc 124
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 ttctgcattcgatgaggtttttgaaggggattgtgtttgaacccactccaccctcctccc 556
Query: 125 tggtcacatgatgcagaagaggggagtactcttactacgcgctcctcaggatcccactga 184
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 555 tggtcacatgatgcagaagaggggagtactcttactactcgctcctcaggatcccactga 496
Query: 185 atgtggacttggtcctatccctgctgctttgactgactcataaatagtgctgatcactcc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 atgtggacttggtcctatccctgctgctttgactgactcataaatagtgctgatcactcc 436
Query: 245 tgggtaccctgcaagttgacaagggcagatgcctctgttgagggcaggatgccctgtcgg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 tgggtaccctgcaagttgacaagggcagatgcctctgttgagggcaggatgccctgtcgg 376
Query: 305 tcatgctaactcagcatcagatgaggtcaggacacaggctttggaaaaatgtggacttac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 tcatgctaactcagcatcagatgaggtcaggacacaggctttggaaaaatgtggacttac 316
Query: 365 ctgccttttacctacataaaaagaaccatgaaatccctttcatttataaggattttcaca 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 315 ctgccttttacctacataaaaagaaccatgaaatccctttcatttataaggattttcaca 256
Query: 425 ctatttctgtattttttttattactttaacccctcagagattgaacagagcc 476
||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 ctatttctgta-tttttttattactttaacccctcagagattgaacagagcc 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 478
Length of database: 877
Length adjustment: 10
Effective length of query: 468
Effective length of database: 867
Effective search space: 405756
Effective search space used: 405756
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no358_f12.g1 MSMg01no358_f12.g1 CHROMAT_FILE:
MSMg01no358_f12.g1 PHD_FILE: MSMg01no358_f12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:52:35 2005
(319 letters)
>mm_chr17_14363851_14364568
Length = 718
Score = 536 bits (277), Expect = e-157
Identities = 307/317 (96%), Gaps = 1/317 (0%)
Strand = Plus / Plus
Query: 1 caggtggtagcgatgacaggatccacactttctagagcatgttctttatttatatattaa 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 201 caggtggtagcgatgacaggatccacactttctagagcatgtactttatttatatattaa 260
Query: 61 gaatatgtttcatttgtctaacataattttggcgtgtgaaactgatctttgtgtgacgtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatatgtttcatttgtctaacataattttggcgtgtgaaactgatctttgtgtgacgtg 320
Query: 121 ttagatggcactgagaaatgcatgggttctatcggagagacacccactctgaggtgaaag 180
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 321 ttagatggcattgagaaatgcatgggttctaccggagagacacccactctgaggtgaaag 380
Query: 181 ggcagcagagccttggaacccatggggagttggtagagtcacctggggtgggtgccgcct 240
|||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggcagcagagccctggaacccacggggagttggtagagtcacctggggtgggtgccgcct 440
Query: 241 ggaggaacacaacacccaggactctgcttccaaaaaacaaagagagagaggagggaaggg 300
|||||||||||||||||||||||||||||||||||| | ||||||| |||| ||||| ||
Sbjct: 441 ggaggaacacaacacccaggactctgcttccaaaaa-cgaagagagggaggggggaaagg 499
Query: 301 ggagggggatgaggaga 317
|||||||||||||||||
Sbjct: 500 ggagggggatgaggaga 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 718
Length adjustment: 9
Effective length of query: 310
Effective length of database: 709
Effective search space: 219790
Effective search space used: 219790
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
