Query= MSMg01no359_p08.b1 MSMg01no359_p08.b1 CHROMAT_FILE:
MSMg01no359_p08.b1 PHD_FILE: MSMg01no359_p08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:34 2005
(481 letters)
>mm_chr17_34296741_34297621
Length = 881
Score = 702 bits (363), Expect = 0.0
Identities = 416/439 (94%), Gaps = 10/439 (2%)
Strand = Plus / Minus
Query: 43 aaggtgggtcactgagcaaaggcacctgctgccaagccgacaccctgagctcagcaccta 102
||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 881 aaggtgggtcactaagcaaaggcacctgctgccaagccgacaccctgagctcagctccta 822
Query: 103 gaaccctcacagtgggagagaaacaactcctgcaaattgtctctgatctctacatgtatg 162
|||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 821 gaaccctcacagtgggagagaaaccactcctgcaaactgtctctgatctctacatgtatg 762
Query: 163 ctctcgcaagcactctcacatgggcatgtgagtgtgctcacagacatgtgcaaatacaca 222
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 761 ctctggcaagcactctcacatgggcatgtgcgtgtgctcacagacatgtgcaaatacaca 702
Query: 223 aacacacacacacacacaggcacacacgcatgcagataaaatggcgtctctaaagtcctc 282
| ||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 701 a--------acacacacaggcacaca--catgcagataaaatggcgtctctaaagtcctc 652
Query: 283 ttctgagttgagctaagagcgtccctcttcctcacagggcatctccgcctccctacaggt 342
||||||| |||||||||||| |||||||||||||||||||| |||| |||||||||||||
Sbjct: 651 ttctgagctgagctaagagcatccctcttcctcacagggcagctccacctccctacaggt 592
Query: 343 caatttcttccctcgagttacactttcaaaagctgcccccaggtctgcttcagggagatg 402
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 591 caatttcttccctcgagttacactttcaaaagctgcccccaggtctgcttcagggagatg 532
Query: 403 gaaacctcgaggtggcacaggctatgtcacagaaaaagatcaacttcagtcacgctctgc 462
||||||||| ||||||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct: 531 gaaacctcggggtggcacaggctatgtcacagaaaaagatcaacttcagccacgctttgc 472
Query: 463 cacagtccctcccccaaaa 481
|||||||||||||||||||
Sbjct: 471 cacagtccctcccccaaaa 453
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 481
Length of database: 881
Length adjustment: 10
Effective length of query: 471
Effective length of database: 871
Effective search space: 410241
Effective search space used: 410241
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no359_p08.g1 MSMg01no359_p08.g1 CHROMAT_FILE:
MSMg01no359_p08.g1 PHD_FILE: MSMg01no359_p08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:54:34 2005
(337 letters)
>mm_chr17_34128715_34129451
Length = 737
Score = 547 bits (283), Expect = e-160
Identities = 309/321 (96%), Gaps = 7/321 (2%)
Strand = Plus / Plus
Query: 5 ggctcacaatcatctataatgagatctggcgccctctactggcagacaggcacatacgca 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 212 ggctcacaatcatctataatgagatctggcgccctctactggcagacaggcacatacgca 271
Query: 65 ggcagaacaatgtacctaatgaataaataaatcttaaaaaaaaaaaagaaattcaaggtc 124
||||||||||||||||| ||||||||| |||||||||||||| ||||||||||||
Sbjct: 272 ggcagaacaatgtacct----aataaataagtcttaaaaaaaaaa---aaattcaaggtc 324
Query: 125 aacctgagctacaacaaggcatacaacacaaacagcctaaatgaacgaacacccaggctc 184
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 325 aacctgagctacaacaaggcatacaacacaaacagcctaaatgaacgaacacacaggctc 384
Query: 185 catagaccagtagcatcataggccactctgtagggtgagttttgtcgatttcttccttcc 244
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct: 385 catagaccagtagcatcagaggccactctgtagggtgagttgtgtcgatttcttccttcc 444
Query: 245 cttgctgaatccctaagatcagtgtgtacatctagtgcaggggaccctagagtcctgcag 304
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 445 cttgctgaatccctaagatcagtgtgtacatctagtgcaggggaccctacagtcctgcag 504
Query: 305 tactgtttggagctgttccta 325
|||||||||||||||||||||
Sbjct: 505 tactgtttggagctgttccta 525
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
