TTGGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCAATG
ATTCTTTTAAATATCACATGACCATACTACATTTAATCATAAAATGTTTT
CTCTAATTAGATTCTAAAGATGATATTATATAAACCTATATAATATAATC
ATCCACTGAGAAGTCAGGGTGTAATTTTATAAAGAGGTAAGTTTTCAGTC
ATTTGCTTTATTTAAAATTTAGGCCACCATCATTTCAACTAGTCTTTTCT
TGATAAGCCTTTTAAGAAAAATGAAATGATTTCAATGGTAAAATTTAATG
AAACTTTCAGCTAAACTTACTAAAAGTAGTGGCTCGAACCCTTTTCACAG
TAATTGGAAACATTTTTATTTAATTCTCTATCATTGCAGAAAAAAAAAAT
CTCTGTTACAATTCCTGTTACTCTGAAATTCCTTGGCTACCGCTGAGGCC
CAGCATATTGAATCTTTACTGGTAACCAGCATAAGTGTGATTTAGGCATG
TTCATAAGAAAAGATACCAATCCAACATTATCCAAAGAAGATGTGATTTT
CAGAATGATGGCAGAGATAANAGAATATAAGTCTCTTAAGAATACATAGG
ATAAAATAAAATATGAACTGCTTTGCTATTTTGTACTGAGATGGTTTAGT
TTATTAAGAAGCCTTTCTAGTTCTTCTTCCCGTGGATCATAAATAATGAC
ATGAGGATAGGATTTCCCCTTCCGGAAACTTAAGAAATTTAGAAAATATT
TTGTGAATTTAGAAAAAAAACTGCGCGGG

NTCGATGATGTGNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTGAGCCCCATTTT
TTAATGGGGTTACCTTAGAAGTGGGAACAAAACACCCATGGAAGGAGTTA
CAGAGACAAAGTTTGGAGCTGAGATGAAAGGATGGACCATGTAGAGACTG
CCATATCCAGGGATCCACCCCATAATCAGCATCCAAACGCTGACACCATT
GCATACACTAGCAAGATTTTATCGAAAGGACCCAGATGTAGCTGTCTCTT
GTGAGACTATGCCGGGGCCTAGCAAACACAGAAGTGGATGCTCACAGTCA
GCTAATGGATGGATCACAGGACTCCCAATGGGGGAGCTAGAGAAAGTACC
CAAGGAGCTAAAGGGATCTGCAACCCTATAGGTGGAACAATATTATGAAC
TAACCAGTACCCTGGAGCTCTTGACTCTAGCTGCATATGTATCATAAGAT
GGGCTATTCGGCCATCACTGGAAAGAGAGGGCCATTGGACTTGTCAACTT
TATATGCCCCAGTACGGGGGAACTCCAGGGTCTATAAAGTGAAAAGGGTG
TTTTTGTTGATGCCCTTTTTCCTTTATCACCTTTTTTTTCGGTTTTTTTG
TCTCTCTTACTTTTTCTCCTTTTTACATCATATTTTGTTTTGGAATTTTT
ATCTTATCCGGCCCGTGATTTCATTCTTCTTTTGTATTTATAATATCTCT
TGTCATCACTCTTGTCTTTCTATATAN

Query= MSMg01no363_f18.b1 MSMg01no363_f18.b1 CHROMAT_FILE:
MSMg01no363_f18.b1 PHD_FILE: MSMg01no363_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:02 2005
         (517 letters)



>mm_chr17_92431649_92432566
          Length = 918

 Score =  986 bits (510), Expect = 0.0
 Identities = 513/514 (99%), Gaps = 1/514 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattc-aatgattcttttaaatatcacatgaccatactacatttaatcataaaatgttt 63
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 718 gaattcaaatgattcttttaaatatcacatgaccatactacatttaatcataaaatgttt 659

                                                                       
Query: 64  tctctaattagattctaaagatgatattatataaacctatataatataatcatccactga 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 658 tctctaattagattctaaagatgatattatataaacctatataatataatcatccactga 599

                                                                       
Query: 124 gaagtcagggtgtaattttataaagaggtaagttttcagtcatttgctttatttaaaatt 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 598 gaagtcagggtgtaattttataaagaggtaagttttcagtcatttgctttatttaaaatt 539

                                                                       
Query: 184 taggccaccatcatttcaactagtcttttcttgataagccttttaagaaaaatgaaatga 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 538 taggccaccatcatttcaactagtcttttcttgataagccttttaagaaaaatgaaatga 479

                                                                       
Query: 244 tttcaatggtaaaatttaatgaaactttcagctaaacttactaaaagtagtggctcgaac 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 478 tttcaatggtaaaatttaatgaaactttcagctaaacttactaaaagtagtggctcgaac 419

                                                                       
Query: 304 ccttttcacagtaattggaaacatttttatttaattctctatcattgcagaaaaaaaaaa 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 418 ccttttcacagtaattggaaacatttttatttaattctctatcattgcagaaaaaaaaaa 359

                                                                       
Query: 364 tctctgttacaattcctgttactctgaaattccttggctaccgctgaggcccagcatatt 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 358 tctctgttacaattcctgttactctgaaattccttggctaccgctgaggcccagcatatt 299

                                                                       
Query: 424 gaatctttactggtaaccagcataagtgtgatttaggcatgttcataagaaaagatacca 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 298 gaatctttactggtaaccagcataagtgtgatttaggcatgttcataagaaaagatacca 239

                                             
Query: 484 atccaacattatccaaagaagatgtgattttcag 517
           ||||||||||||||||||||||||||||||||||
Sbjct: 238 atccaacattatccaaagaagatgtgattttcag 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 517
Length of database: 918
Length adjustment: 10
Effective length of query: 507
Effective length of database: 908
Effective search space:   460356
Effective search space used:   460356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)