Query= MSMg01no363_h12.b1 MSMg01no363_h12.b1 CHROMAT_FILE:
MSMg01no363_h12.b1 PHD_FILE: MSMg01no363_h12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:11 2005
(524 letters)
>mm_chr17_90273682_90274604
Length = 923
Score = 924 bits (478), Expect = 0.0
Identities = 513/525 (97%), Gaps = 3/525 (0%)
Strand = Plus / Plus
Query: 1 ttctttctttcaaggtttctgcggctcatcccagtgctacttagttactcacttaaaata 60
||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 201 ttctttctttcaaggttcctgtggctcatcccagtgctacttagttactcacttaaaa-a 259
Query: 61 tatatatacatatattcatgttattcacattactcgatattttaaagtgagtcaaactga 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 260 tatatatacatatattcatgttattcacattactcgatattttaaagtgagtcaaactca 319
Query: 121 tctgctgtctggtgagtaaaaatttagaagaagagtggagtgtccaagaaccaacctaat 180
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tctgctgtctggtgagtacaaatttagaagaagagtggagtgtccaagaaccaacctaat 379
Query: 181 ttcttgttttagcttgttgaagcagttttgaaagtagagacgacagagcttctgaggcgg 240
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 380 ttcttgttttagcttgttgaagcagttttgaaagtagagactacagagcttctgaggcgg 439
Query: 241 caccattttcggctccagacaactggccaccttcctggccagaggacaggtgtatgcccg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 caccattttcggctccagacaactggccaccttcctggccagaggacaggtgtatgcccg 499
Query: 301 gccctggtggcttctgcctcaggttccacgggagccagctcagttcctggactccgcggc 360
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 500 gccctggtggcttctgcctcaggttccacgggagccagctcagttcctggactccgagg- 558
Query: 361 tgg-cagtctgcacaggtgagagtgtggactacagaggctagcaacttctgggacaggca 419
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 tgggcagtctgcacaggtgagagtgtggactacagaggctagcaacttctgggacaggca 618
Query: 420 agattcacagagcttctggggcagcgtcatttttgggctacagacatccggccaccttcc 479
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 619 agattcacagagcttctggggcagcgccatttttgggctacagacatccggccaccttcc 678
Query: 480 tgtccagaggacaggtgtccacccagcctcgtaggnctttgcctc 524
||||||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 679 tgtccagaggacaggtgtccacccagcctcggaggcctttgcctc 723
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 923
Length adjustment: 10
Effective length of query: 514
Effective length of database: 913
Effective search space: 469282
Effective search space used: 469282
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no363_h12.g1 MSMg01no363_h12.g1 CHROMAT_FILE:
MSMg01no363_h12.g1 PHD_FILE: MSMg01no363_h12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 22:59:11 2005
(235 letters)
>mm_chr17_90476050_90476682
Length = 633
Score = 404 bits (209), Expect = e-117
Identities = 223/229 (97%), Gaps = 4/229 (1%)
Strand = Plus / Minus
Query: 1 acattgaaagaaaac-tattgataacatcataattattagctgagtcagattctaaggaa 59
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 acattgaaagaaaacatattgataacatcataattattagctgagtcagattctaaggaa 367
Query: 60 tgttacgattacagagtcaaattacatgatataacaaaagccagaggctagaagtcagaa 119
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 tgttaagattacagagtcaaattacatgatataacaaaagccagaggctagaagtcagaa 307
Query: 120 ataaagcctgggaagttaattttgacagttctgtaatggtttttttctgtattggttttt 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 306 ataaagcctgggaagttaattttgacagttctgtaatggtttttttctgtaatggttttt 247
Query: 180 ttctgtaatggtttttgttccttttttttttcagttttatttcatttgc 228
||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 246 ttctgtaatggtttttgttcc---tttttttcagttttatttcatttgc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 235
Length of database: 633
Length adjustment: 9
Effective length of query: 226
Effective length of database: 624
Effective search space: 141024
Effective search space used: 141024
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
