CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCTAGTTGTAACATAAAAAGGTCAAGTGTAAGTAGAATCTCTTAATAC
ACAATAGATTATCATCCCATCATCAAGAAATTAAACATCAACAAATGCTG
ACAGGAATTTTATAGGGAAGAAAGTTCCCGGTTCTTTAATGGTGGAATGC
AGGCTTGTATGTCCACTATGGAAATCAATAAGAAAGAAAGAAAAAAGAAA
AAGAAAAAAAGAAAAGAAAAGAGAGCAAAAACCAACAATCAAAACAACCC
TGAAATTTATTTATTTTTATTTTTTTAAATTTGGTATTTATTTCATTTAC
ATTTCCAATGCTATCCCAAAAGTCCCCCACATGCTCCCCTACCCACTTCC
CCACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTGTACTGGGGC
ATATAAAGATTGCACGACCAATGGGCCTCTCTTTCCACTGATGGCCAACT
AGGCCATTTTCTGATTCATATGCAGCTAGAGACACAAGCTCCAGGGGTGT
ACTGGTTAGNTCATATTGTTGTTCCACCTATAGGATTGCCGATCCCTTTA
GCTCCTTGGGGACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTTATCCAT
CCCATAGCTGACTGTGAGCATCCCTTCTGGGGTTGTTAGGCCCCGCGATA
ACTCCCCAAAAAAAGGTATATCTGGGTGCTTCTTTAAAAACTTGTTAGGG
GG

NNCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXCATACAGACATTCCTTGTTTT
CTCAGGAGGAGGTTGCATGACTGGCACCTAAAATGTTGTAAGCCCCTCTC
TGGAATATACACAGAAGGCCATATTCTCTTCCTTTCCTTAAATAATCCTA
GAGTAAATATCTGCCACAGAAACCAAACGAAATCTGTCTGTTTGATCTGA
TGTTAATTTTCAAAATTAGATATAATGGCAACAACATGTAACTCAGTCAA
TTCATCCATGTTTGTTTGAACAATAATATCTACTCCTCTCTAAAACAAAT
CTATGTGATGCCCACACACACACACACTCCATTAAGCTTCTCTTATCCAA
ACCCTACCCGCAAATATTATTAATAGCGATTCAGGTTTAGAAAAAAATAG
CTAATATTTAGAATGGATAACTCATGAAATTCCTTATATGCTACACAGAA
ATTAAACTATTAAGAAAATAATAGTGGCAGTCTTGAGTTGCTGACTTCTA
CTAATGATTTAGTTGAGTCTTAAAATTTATGTGCTAAATATTCTTCCTTA
CATTTTTCCATATTCCCTGTTACTTCAAATCTGCAGGGGTACATCAAAAA
GATGTTGAAACAGTGCAAGTGAGAGAAAAGGTCCAAAAGGCACTACTTGG
CAACATTCTAGAAAATTGTTGGAATGGATCTTATTATGAGAAGGTGAATA
AATC

Query= MSMg01no367_m07.g1 MSMg01no367_m07.g1 CHROMAT_FILE:
MSMg01no367_m07.g1 PHD_FILE: MSMg01no367_m07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:05:02 2005
         (540 letters)



>mm_chr17_77514148_77515085
          Length = 938

 Score = 1004 bits (519), Expect = 0.0
 Identities = 529/533 (99%), Gaps = 2/533 (0%)
 Strand = Plus / Plus

                                                                       
Query: 8   acattccttgttttctcaggaggaggttgcatgactggcacctaaaatgttgtaagcccc 67
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 acattccttgttttctcaggaggaggttgcatgactggcacctaaaatgttgtaagcccc 267

                                                                       
Query: 68  tctctggaatatacacagaaggccatattctcttcctttccttaaataatcctagagtaa 127
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 tctctggaatatacacagaaggccatattctcttcctttccttaaataatcctagagtaa 327

                                                                       
Query: 128 atatctgccacagaaaccaaacgaaatctgtctgtttgatctgatgttaattttcaaaat 187
           | |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 acatctgctacagaaaccaaacgaaatctgtctgtttgatctgatgttaattttcaaaat 387

                                                                       
Query: 188 tagatataatggcaacaacatgtaactcagtcaattcatccatgtttgtttgaacaataa 247
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 tagatataatggcaacaacatgtaactcagtcaattcatccatgtttgtttgaacaataa 447

                                                                       
Query: 248 tatctactcctctctaaaacaaatctatgtgatgcccacacacacacacactccattaag 307
           |||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||
Sbjct: 448 tatctactcctctctaaaacaaatctatgtgatgcccacacacacacac--tccattaag 505

                                                                       
Query: 308 cttctcttatccaaaccctacccgcaaatattattaatagcgattcaggtttagaaaaaa 367
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 cttctcttatccaaaccctacccgcaaatattattaatagcgattcaggtttagaaaaaa 565

                                                                       
Query: 368 atagctaatatttagaatggataactcatgaaattccttatatgctacacagaaattaaa 427
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atagctaatatttagaatggataactcatgaaattccttatatgctacacagaaattaaa 625

                                                                       
Query: 428 ctattaagaaaataatagtggcagtcttgagttgctgacttctactaatgatttagttga 487
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 ctattaagaaaataatagtggcagtcttgagttgctgacttctactaatgatttagttga 685

                                                                
Query: 488 gtcttaaaatttatgtgctaaatattcttccttacatttttccatattccctg 540
           |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 686 gtcttaaaatttatgtgctaaatattcttccttacatttttccatattccctg 738


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 938
Length adjustment: 10
Effective length of query: 530
Effective length of database: 928
Effective search space:   491840
Effective search space used:   491840
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)