Query= MSMg01no369_p23.b1 MSMg01no369_p23.b1 CHROMAT_FILE:
MSMg01no369_p23.b1 PHD_FILE: MSMg01no369_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:53 2005
(341 letters)
>mm_chr17_74191347_74192088
Length = 742
Score = 543 bits (281), Expect = e-159
Identities = 325/349 (93%), Gaps = 17/349 (4%)
Strand = Plus / Plus
Query: 10 ggaattcttcccccttgtc-tagatgtgatattccccaaagctccgagaagtggtttctt 68
|||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 ggaactcttcccccaagtcatagatgtgatattccccaaagctccgagaagtggtttctt 253
Query: 69 gcttaagatagatccaaatttgccatcacacctttggatggacatacatcactccctgta 128
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 gcttaagatagatccaaatttgccatcacacctttggatggacatacatcactccctgta 313
Query: 129 aggaccatgtgacctgtttcaagttgacttaagtttgtaattcagatgtactttcaa--- 185
||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 314 aggaccatgtgacctgtttcaagttaacttaagtttgtaattcaaatgtactttcaaagc 373
Query: 186 ------------ctcctttcaaagcttgtagacataaaaagttctttcgatgaagcagtc 233
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 tagtggaagcaactcctttcaaagcttgtagacataaaaagttctttcgatgaagcagtc 433
Query: 234 tctgctcagcagactgtatttt-ctaccccaactcttgaaggctttttgtggacattgat 292
|||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 434 tctgcttagcagactgtatttttctaccccaactcttgaaggctttttgtggacattgat 493
Query: 293 gaaatcataggatggagatctgagtctttaatggtgtcccaaataggca 341
||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 494 gaaatcatagggtggagatctgagtctttaatggtgtcccaaataggca 542
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 341
Length of database: 742
Length adjustment: 9
Effective length of query: 332
Effective length of database: 733
Effective search space: 243356
Effective search space used: 243356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no369_p23.g1 MSMg01no369_p23.g1 CHROMAT_FILE:
MSMg01no369_p23.g1 PHD_FILE: MSMg01no369_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:07:54 2005
(160 letters)
>mm_chr17_74340063_74340622
Length = 560
Score = 292 bits (151), Expect = 7e-84
Identities = 157/159 (98%)
Strand = Plus / Minus
Query: 2 tttttgttttttctcaatatggttaaagttcttgtaaggcaagttatttaatccatacct 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 360 tttttgttttttctcaatatggttaaagttcttgtaaggcaagttatttaatccatacct 301
Query: 62 ttaataacatggactccagaatagctaggatcattcctatctctcccacattgcaaaatc 121
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 300 ttaataacatagactccagaatagctaggatcattcctatctctcccacattgcaaaatc 241
Query: 122 actgcacacagtgtttggggaaaggctagcaagtcttag 160
|||||||||||||||||||||||||| ||||||||||||
Sbjct: 240 actgcacacagtgtttggggaaaggcaagcaagtcttag 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 160
Length of database: 560
Length adjustment: 8
Effective length of query: 152
Effective length of database: 552
Effective search space: 83904
Effective search space used: 83904
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
