Query= MSMg01no374_d19.b1 MSMg01no374_d19.b1 CHROMAT_FILE:
MSMg01no374_d19.b1 PHD_FILE: MSMg01no374_d19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:25 2005
(533 letters)
>mm_chr17_70612246_70613178
Length = 933
Score = 899 bits (465), Expect = 0.0
Identities = 481/487 (98%), Gaps = 2/487 (0%)
Strand = Plus / Minus
Query: 4 ggaattcattaagcttgaaggtctcagacaaataattagggctgcctcattatcttcaca 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 ggaattcattaagcttgaaggtctcagacaaataattagggctgcctcattatcttcaca 426
Query: 64 acttcatgtggatctgcttgacacattcctctattagtcttccagtatgatttgactaag 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 acttcatgtggatctgcttgacacattcctctattagtcttccagtatgatttgactaag 366
Query: 124 aaagacagaccacatcctgtaggaagtcaaactgtagttaatgctgatgtgttaagggca 183
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 365 aaagacagaccacatcctgtaggaagtcaaactgtagttaacgctgatgtgttaagggca 306
Query: 184 acacatctgacagcctagaagatattttacaatgcttctaactgtgcataaaaataaaag 243
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 305 acacatctgacagcctagaagatattttacaatgcttctaactgtgtataaaaataaaag 246
Query: 244 gaagcacagacttgtacttaatgatgaacatttaaattgaattatgtatttgtttatgta 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 gaagcacagacttgtacttaatgatgaacatttaaattgaattatgtatttgtttatgta 186
Query: 304 tcactctctctgtatgtaacaataatacttaagagaaaagaggccatggatttgagaagg 363
|||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 185 tcactctctctgta--taacaataatacttaagggaaaagaggccatggatttgagaagg 128
Query: 364 agtaagggagattggaaggactcaatggagaagagggaactgatatacgtacagtacata 423
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 127 agtaagggagattggaaggactcaagggagaagagggaactgatatacgtacagtacata 68
Query: 424 tctatgaaattaaaaaataaattaaaaactttgttaactgtgattacactaaaacaaata 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 67 tctatgaaattaaaaaataaattaaaaactttgttaactgtgattacactaaaacaaata 8
Query: 484 aacaaaa 490
|||||||
Sbjct: 7 aacaaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 533
Length of database: 933
Length adjustment: 10
Effective length of query: 523
Effective length of database: 923
Effective search space: 482729
Effective search space used: 482729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no374_d19.g1 MSMg01no374_d19.g1 CHROMAT_FILE:
MSMg01no374_d19.g1 PHD_FILE: MSMg01no374_d19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:25 2005
(439 letters)
>mm_chr17_70422815_70423653
Length = 839
Score = 721 bits (373), Expect = 0.0
Identities = 415/429 (96%)
Strand = Plus / Plus
Query: 7 acctttcctttctcaaccttgatgttgtaagagtgccaactatttgctttgaagaatatc 66
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 accttttctttctcaaccttgatgttgtaagagtgccaactatttgctttgaagaatatc 266
Query: 67 cctcaattgattcgcaaagttttcctttctggctaaattcaagttgtttgtcctttgtct 126
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 267 cctcaattgattcgcaaagttttcctttctagctaaattcaagttgtttgtcctttgtct 326
Query: 127 gactatcatggaaaccaaagggtgtggtctcaggtggttctggaggcccagggaagtgaa 186
||||||||| ||| | || |||||||||||| |||||||||||||||||||||| |||||
Sbjct: 327 gactatcatagaagctaaggggtgtggtctccggtggttctggaggcccagggaggtgaa 386
Query: 187 atttactcccttggttgatgtggggagtgtcatttctttttcactgccaatttactttct 246
|||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 387 atttactcccttagttgatgtggagagtgtcatttctttttcactgccaatttactttct 446
Query: 247 ccttctctcttggctactaagtgtcttgtgggaaggtcacctggaaatatctaatatcct 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ccttctctcttggctactaagtgtcttgtgggaaggtcacctggaaatatctaatatcct 506
Query: 307 atttactcatttatttccccttacttcttttgacacccagaaattatctctgctttcaaa 366
|||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 507 atttactcatttattttcccttacttcttttaacacccagaaattatctctgctttcaaa 566
Query: 367 gccattgataatgtttgtgggaatgttattttctttcacattattctttctgtgcttttc 426
||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 accattgataatgtttatgggaatgttattttctttcacattattctttctgtgcttttc 626
Query: 427 catgtgaat 435
|||||||||
Sbjct: 627 catgtgaat 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
