ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAAT
TCATTTTAGTCTTGGATGTAGGATGTCATTAAAGAACTGGACAGCTGACT
GGGAGAGGTCAGGATTCCACACACGTTTTTAAAGTGTCACCAGGTGGTCA
TTTTTGGTAAACTTTGAAGTGTTTGAATGAAGCCATGAAGGATAATCTAT
CAGGAGTATATTAACAGAAGTAGAAGTGAGATTATAATAATTTAACCACA
TAAGGAATTAGATTATTTTCTTATGAAATAAAATGATCAGAGACAGGCCT
TCTGGTAATCCAGGCCTTTAACCCAACTATAATTCCAGTTACTCAAAGGG
CTAAAGTGGCAGATCACAAGCTCAAGGACAGCCTGGGCTACATGGTTAGT
TCAATCCCTGCCTAGAAAAATTAGGGAGATTCTGCATTCGAAAAAACAAA
ACAAAATAGAGAAAACCAAAAAACCAAAACCAAACAACCAAAAAACCAAA
CAGAAGAAGGGCTAGGCTTGCAGCTTTAAGGTAGAGAACTCCTGTGCTGT
GGGAAAAGCTCTAAGTGTAACCCTAGTAATGCACAAAACCAAAATACAAA
ACAATTAAATGGTGACACAGTCTGTTCTTAGTATTTTCACGACCCTGGGT
TCAATCCCCAGCAACNAGACCTACAACTAGACATATGAGACAAACAAAAC
ATCTGGAGATATTTGGTCTAGAAAAAGTAAAATTTTCAAAGACCCCATGG
AAGCAACAGGTTCTGTTCAACTTTCAG

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXAACATTGAACCAGTTGTGTTCTCAACATTTTTCTCAAAAATTATT
TTATATTTAGATTATAATTCAGTAGATATAAATTAAACTCTGTACTTCAT
CTATATCTGTCAGTCTTTTTTCTATTTTCTTTTTTCTTTTTTGTTTGTTT
GTTTCTGTGAGTCAAGGTTTCTCTGTGTAGTCCAGACTGCCCTGGAATTT
GGTCTGTAGGCCAAGCTGGCCTCAAACTCAGAGAGTTACCTGATTCTGCC
TCCTAAGTGCTAGGATTAAACGTGTGGGCCACCACCTCTTTGTTTCTTTT
TACTTTTAGAATTATACACACACACACACACACACACACACACATATTTG
GGCTGAAGAGATGGCTTAACTATTAAGGGCTAGGCTCACAACCAAATATA
TATATTACATATTTCTGCATGCATTCATGGCTGTGTGTGTGTGTGTGTGT
GTGTGTGCGTGAGCGTATCTCCTTATTCCTTTTCACTTTCCATTTATTCC
CATTTCGTTCATCCTTTTTGTTTTCTGTGTAAAACTTTCCCTCTCCCTTC
TCCACTTTGCTTCTACTCCTCTTCTCCCCTACCCTACCTTCTATTCACAC
AACATTTACCGTATTAACTACTTCATCTTCTTTGTGTTTCTCTTGCTATG
TATCCCTTCTTGTCTATGCGTTCATTTCGTCGTTCACATC

Query= MSMg01no374_h02.b1 MSMg01no374_h02.b1 CHROMAT_FILE:
MSMg01no374_h02.b1 PHD_FILE: MSMg01no374_h02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:13:41 2005
         (575 letters)



>mm_chr17_4213262_4214236
          Length = 975

 Score = 1065 bits (551), Expect = 0.0
 Identities = 566/571 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcattttagtcttggatgtaggatgtcattaaagaactggacagctgactgggaga 64
           ||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 205 gaattcattttagtcatggatgtaggatgtcattaaagaactggtcagctgactgggaga 264

                                                                       
Query: 65  ggtcaggattccacacacgtttttaaagtgtcaccaggtggtcatttttggtaaactttg 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ggtcaggattccacacacgtttttaaagtgtcaccaggtggtcatttttggtaaactttg 324

                                                                       
Query: 125 aagtgtttgaatgaagccatgaaggataatctatcaggagtatattaacagaagtagaag 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aagtgtttgaatgaagccatgaaggataatctatcaggagtatattaacagaagtagaag 384

                                                                       
Query: 185 tgagattataataatttaaccacataaggaattagattattttcttatgaaataaaatga 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tgagattataataatttaaccacataaggaattagattattttcttatgaaataaaatga 444

                                                                       
Query: 245 tcagagacaggccttctggtaatccaggcctttaacccaactataattccagttactcaa 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tcagagacaggccttctggtaatccaggcctttaacccaactataattccagttactcaa 504

                                                                       
Query: 305 agggctaaagtggcagatcacaagctcaaggacagcctgggctacatggttagttcaatc 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 505 agggctaaagtggcagatcacaagctcaaggacagcctgggctacatggttagttcaatt 564

                                                                       
Query: 365 cctgcctagaaaaattagggagattctgcattcgaaaaaacaaaacaaaatagagaaaac 424
           |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 565 cctgcctagaaaaattagggagattctgcatttgaaaaaacaaaacaaaatagagaaaac 624

                                                                       
Query: 425 caaaaaaccaaaaccaaacaaccaaaaaaccaaacagaagaagggctaggcttgcagctt 484
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 625 caaaaaaccaaaaccaaacaaccaaacaaccaaacagaagaagggctaggcttgcagctt 684

                                                                       
Query: 485 taaggtagagaactcctgtgctgtgggaaaagctctaagtgtaaccctagtaatgcacaa 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taaggtagagaactcctgtgctgtgggaaaagctctaagtgtaaccctagtaatgcacaa 744

                                          
Query: 545 aaccaaaatacaaaacaattaaatggtgaca 575
           |||||||||||||||||||||||||||||||
Sbjct: 745 aaccaaaatacaaaacaattaaatggtgaca 775


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 575
Length of database: 975
Length adjustment: 10
Effective length of query: 565
Effective length of database: 965
Effective search space:   545225
Effective search space used:   545225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)