Query= MSMg01no375_h17.b1 MSMg01no375_h17.b1 CHROMAT_FILE:
MSMg01no375_h17.b1 PHD_FILE: MSMg01no375_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:05 2005
(439 letters)
>mm_chr17_30772904_30773742
Length = 839
Score = 706 bits (365), Expect = 0.0
Identities = 406/435 (93%), Gaps = 24/435 (5%)
Strand = Plus / Minus
Query: 5 gaattctatcaagattcctgcattagatcaataaaccaaacccaggaagctgtgtggcat 64
|||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 467 gaattctatcaagacacctgcattagatcaataaaccaaacccaggaggctgtgtggcat 408
Query: 65 cacagctcacctttataaagccagccttgaccacaaggtatgttatagtggggaactttg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 407 cacagctcacctttataaagccagccttgaccacaaggtatgttatagtggggaactttg 348
Query: 125 gtgacctggtaaaccacagtctgtctccagctaattgtgcaccatggcacctctggtcta 184
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 347 gtgacctggtaaaccacagtctgtctccagctaattgtgcaccatggcgcctctggtcta 288
Query: 185 atacacacatctccagggtggagggtaggagagaaaggcaccatcagtccatgtgcatac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 atacacacatctccagggtggagggtaggagagaaaggcaccatcagtccatgtgcatac 228
Query: 245 atgctcctgtgcgcccgcacgtgcacacacacacacacacacacacacacacacacacac 304
|||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 227 atgctcctgtgcgcccgcacgtgcacgcacacacacacacacacacacacacac------ 174
Query: 305 acacacacacacacacactcgtacacaccccaaaacaaaggggaaaacaaatacgggcac 364
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 ------------------tcgtacacaccccaaaacaaaggggaaaacaaatacgggcac 132
Query: 365 gacttcagcttaccgacgggcaatccaaaattagttcttccacagttactaagtccaacc 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gacttcagcttaccgacgggcaatccaaaattagttcttccacagttactaagtccaacc 72
Query: 425 caagcttttctccta 439
|||||||||||||||
Sbjct: 71 caagcttttctccta 57
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 42
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 839
Length adjustment: 9
Effective length of query: 430
Effective length of database: 830
Effective search space: 356900
Effective search space used: 356900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no375_h17.g1 MSMg01no375_h17.g1 CHROMAT_FILE:
MSMg01no375_h17.g1 PHD_FILE: MSMg01no375_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:15:05 2005
(169 letters)
>mm_chr17_30528714_30529283
Length = 570
Score = 315 bits (163), Expect = 8e-91
Identities = 166/167 (99%), Gaps = 1/167 (0%)
Strand = Plus / Plus
Query: 4 ggcccagatgacggagaatcagatgtatgatcaaaagaaaagaaagctgttccctgtttg 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggcccagatgacggagaatcagatgtatgatcaaaagaaaagaaagctgttccctgtttg 263
Query: 64 ttctctggagattacctgattatttttt-ctcccagagatggagtaaaagaaaagaagaa 122
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 264 ttctctggagattacctgattatttttttctcccagagatggagtaaaagaaaagaagaa 323
Query: 123 caactcactaatgtatataacctaaaaacaagtatgcaagggtaact 169
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caactcactaatgtatataacctaaaaacaagtatgcaagggtaact 370
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 169
Length of database: 570
Length adjustment: 8
Effective length of query: 161
Effective length of database: 562
Effective search space: 90482
Effective search space used: 90482
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
