Query= MSMg01no376_e17.b1 MSMg01no376_e17.b1 CHROMAT_FILE:
MSMg01no376_e17.b1 PHD_FILE: MSMg01no376_e17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:09 2005
(422 letters)
>mm_chr17_45756014_45756835
Length = 822
Score = 731 bits (378), Expect = 0.0
Identities = 395/401 (98%)
Strand = Plus / Minus
Query: 22 gaaaccacttcctgctctatcttcctccgggctcctgtggctctctgcctatgtatttac 81
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 622 gaaaccacttcctgctctatcttcctccgggatcctgtggctctctgcctatgtatttac 563
Query: 82 ttctaggacctctggggagcctgcagctcccttttcctctctccgtgtttactctgcttc 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 ttctaggacctctggggagcctgcagctcccttttcctctctccgtgtttactctgcttc 503
Query: 142 ccagcgcaggccacagagtgggagtttcctgcctgttcatccccacagcggcgtcactgt 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ccagcgcaggccacagagtgggagtttcctgcctgttcatccccacagcggcgtcactgt 443
Query: 202 ctctccttgacacccacctctcccggcctggccttcaaactctgggtctcctggggcctt 261
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 ctctccttgacacccacctctcccggcctggccttcaaactctgggtctcctggggcctt 383
Query: 262 ggaatcaccttccttccggtgtctgagtcccgctgccacctccccaaggacttcgggatg 321
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 382 ggaatcaccttccttccggtgtctgagtcccgctgtcacctccccaaggacttcgggatg 323
Query: 322 cttctttttggttactgccacctacccagagggaagtctaagactccctcaggctttgct 381
|||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||| |
Sbjct: 322 cttctttttggttactgccacctacccagagggatgtcgaagactccctcaggctttgtt 263
Query: 382 tgtggccccggccttgagttcattaggcagnttttaaattc 422
|||||||||||||||||||||||||||||| ||||||||||
Sbjct: 262 tgtggccccggccttgagttcattaggcagtttttaaattc 222
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no376_e17.g1 MSMg01no376_e17.g1 CHROMAT_FILE:
MSMg01no376_e17.g1 PHD_FILE: MSMg01no376_e17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:16:09 2005
(435 letters)
>mm_chr17_45584759_45585593
Length = 835
Score = 762 bits (394), Expect = 0.0
Identities = 421/430 (97%), Gaps = 1/430 (0%)
Strand = Plus / Plus
Query: 1 caggacggataggactacatggagaaaccctgtaggacgagtgggagaaaatgaagaaaa 60
|||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 201 cagggcggataggactacatggagaaatcctgtaggacgagtgggagaaaatgaagaaaa 260
Query: 61 ttgataggcttttgattaggaagagcctgatgagaggtgatctggtgtttactgtcccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttgataggcttttgattaggaagagcctgatgagaggtgatctggtgtttactgtcccta 320
Query: 121 tgagaggtaatgctggtttcaaggagtctttcaggagtgaattagatcttttcgggtagg 180
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 321 tgagaggtaatgctggtttcaaggagtctttcaggagtgaattagatcttttggggtagg 380
Query: 181 aagtgggttactgggagcaggccttgtggctctacagcctggtacttctccctgttcata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagtgggttactgggagcaggccttgtggctctacagcctggtacttctccctgttcata 440
Query: 241 tttggactgtagatacaatgtgagcagtcaacctcctactaccacaattcctttcatgcc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttggactgtagatacaatgtgagcagtcaacctcctactaccacaattcctttcatgcc 500
Query: 301 tactgccatgtcttctccaccgtggtcgactgcatccctctggtaatgggaggcaaatta 360
| ||||||||||||| | ||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctgccatgtcttcgctaccatggtcgactgcatccctctggtaatgggaggcaaatta 560
Query: 361 aacctttccttctttaagttgcttttgttagagtatttttcacagcaaaacacacacaca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 aacctttccttctttaagttgcttttgttagagtatttttcacagcaaaacacacacaca 620
Query: 421 cacac-acac 429
|||| ||||
Sbjct: 621 tacaccacac 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
