Query= MSMg01no377_c24.b1 MSMg01no377_c24.b1 CHROMAT_FILE:
MSMg01no377_c24.b1 PHD_FILE: MSMg01no377_c24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:17 2005
(279 letters)
>mm_chr17_33972845_33973524
Length = 680
Score = 511 bits (264), Expect = e-149
Identities = 273/276 (98%), Gaps = 1/276 (0%)
Strand = Plus / Plus
Query: 5 gaattctacattagtcttcca-gtgctcggattgtctgttttcattccatactctgctct 63
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctacattagccttccaagtgctcggattgtctgttttcattccatactctgctct 264
Query: 64 agctcatgggctagccttatgtcactagcactgcatctctgttcacttgccatagaggtt 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 agctcatgggctagccttatgtcactagcactgcatctctgttcacttgccatagaggtt 324
Query: 124 ttgtgtggcacccaactatctgaggaagaacggtggacacccattaaccagtgaatgagc 183
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 325 ttgtgtggcacccaactatctgaggaagaacagtggacacccattaaccagtgaatgagc 384
Query: 184 gtgaggtcatgacttctaggaatggttgaggagacggtctttattatagatttgagggag 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgaggtcatgacttctaggaatggttgaggagacggtctttattatagatttgagggag 444
Query: 244 aatttagccagaggatctggaaaggtccagacagaa 279
||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatttagccagaggatctggaaaggtccagacagaa 480
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 680
Length adjustment: 9
Effective length of query: 270
Effective length of database: 671
Effective search space: 181170
Effective search space used: 181170
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no377_c24.g1 MSMg01no377_c24.g1 CHROMAT_FILE:
MSMg01no377_c24.g1 PHD_FILE: MSMg01no377_c24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:17 2005
(345 letters)
>mm_chr17_34222701_34223445
Length = 745
Score = 652 bits (337), Expect = 0.0
Identities = 343/345 (99%)
Strand = Plus / Minus
Query: 1 aaaagcattagtatttgaaatataaatgtttcaataaatagaagctcagaagagaatttt 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 aaaagtattagtatttgaaatataaatgtttcaataaatagaagctcagaagagaatttt 486
Query: 61 tatgcgagctttgccagcagtgtgtccgagcagagacggaggctgcatgtcattcctggc 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 485 tatgcgagctttgccagcagtgtgtccgagcagagacggaggctgcatgtcattcccggc 426
Query: 121 ccataatccgggacgcatgcgcaggacagactgggtccaagcacggctgaacttagtctc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccataatccgggacgcatgcgcaggacagactgggtccaagcacggctgaacttagtctc 366
Query: 181 ttccatagggagctgtttcgatccagacagtctagctgtgtggctttggtgaaagtgctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttccatagggagctgtttcgatccagacagtctagctgtgtggctttggtgaaagtgctt 306
Query: 241 aatgctcttgtgcacatagatgctataagcgtctctcatgtgtcaaaaccacagtgactt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 aatgctcttgtgcacatagatgctataagcgtctctcatgtgtcaaaaccacagtgactt 246
Query: 301 tagtactgtcacgcagattttaggtgagggtaacaagggcgcaga 345
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tagtactgtcacgcagattttaggtgagggtaacaagggcgcaga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 745
Length adjustment: 9
Effective length of query: 336
Effective length of database: 736
Effective search space: 247296
Effective search space used: 247296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
