Query= MSMg01no377_f02.b1 MSMg01no377_f02.b1 CHROMAT_FILE:
MSMg01no377_f02.b1 PHD_FILE: MSMg01no377_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:27 2005
(475 letters)
>mm_chr17_79752171_79753045
Length = 875
Score = 919 bits (475), Expect = 0.0
Identities = 475/475 (100%)
Strand = Plus / Plus
Query: 1 ctctagcagatgagacggctggaaaacagaaactgccacagacccagaaggcttccaaag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctctagcagatgagacggctggaaaacagaaactgccacagacccagaaggcttccaaag 260
Query: 61 ttctcctctaaacatcatctgagagcccaggggctgtgagccccgagactggtagccccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctcctctaaacatcatctgagagcccaggggctgtgagccccgagactggtagccccg 320
Query: 121 tcttccaaccatgggtgaggcctcctggaaaacctaggcacttccagatggactgtcaac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcttccaaccatgggtgaggcctcctggaaaacctaggcacttccagatggactgtcaac 380
Query: 181 cattccttgaatatagatcttaatcctttatctcacacgttacatcgctagacatttcat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cattccttgaatatagatcttaatcctttatctcacacgttacatcgctagacatttcat 440
Query: 241 aacggccttatggccgagtccttcattctgaaaaaggtgtttgtgtatactgacatctaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aacggccttatggccgagtccttcattctgaaaaaggtgtttgtgtatactgacatctaa 500
Query: 301 actgtccatcaaatcacagtggtggaggtatctacaactgtccagaagttgtactcccta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 actgtccatcaaatcacagtggtggaggtatctacaactgtccagaagttgtactcccta 560
Query: 361 gctcagttgttagttgaaagatcttttataagtcagaccattacaggagtcttttaatgg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gctcagttgttagttgaaagatcttttataagtcagaccattacaggagtcttttaatgg 620
Query: 421 acttaggggtgcccctggggcatcctggctgcttcctggggaggcttatttctcc 475
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 acttaggggtgcccctggggcatcctggctgcttcctggggaggcttatttctcc 675
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 475
Length of database: 875
Length adjustment: 10
Effective length of query: 465
Effective length of database: 865
Effective search space: 402225
Effective search space used: 402225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_f02.g1 MSMg01no377_f02.g1 CHROMAT_FILE:
MSMg01no377_f02.g1 PHD_FILE: MSMg01no377_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:27 2005
(412 letters)
>mm_chr17_79951622_79952434
Length = 813
Score = 706 bits (365), Expect = 0.0
Identities = 401/413 (97%), Gaps = 1/413 (0%)
Strand = Plus / Minus
Query: 1 acttggatgtttgggttgcttccgtgtgcaaactgggaaccacaacagtacaaaatcagc 60
||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 613 acttggatgtttgggttgcttccatgtacaaactgggaaccacaacagtacaaaatcagc 554
Query: 61 tctagccatgtgtatgaaatattccacaatatgtgcatgaatgcatatacacatgtattg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 553 tctagccatgtgtatgaaatattccacaatatgtgcatgaatgcatatacacatgtattg 494
Query: 121 tattagctataataatggcttgttccaggacaaggctaatggggacaggaagtaggtata 180
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 493 tattaactataataatggcttgttccaggacaaggctaatggggacaggaagtagatata 434
Query: 181 ggatcttcttggttggctgaatgaggaagagtcaaacatctcactctcatcttaccctgt 240
|||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 433 ggatcttcttggttggctgaatgaggaaaagtcaaacatctcaccctcatcttaccctgt 374
Query: 241 taatactatttttaaacaaattaacttgaagagacctaaggcattttggccatgttttat 300
||||||| |||||||||||||||||||||||||||||||||| ||||| |||||||||||
Sbjct: 373 taatactctttttaaacaaattaacttgaagagacctaaggcgttttgaccatgttttat 314
Query: 301 aaacaagaaaaa-tgtccatgctcatttacaggtggagaaaatggagaactagaaaggaa 359
|||||| ||||| ||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 313 aaacaaaaaaaaatgtccatgctcatttacaggtggagaaaatgaagaactagaaaggaa 254
Query: 360 agctttaaaacagggaaaccagaagattattagagcaaagttccaggaggccc 412
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 253 agctttaaaacagggaaaccagaagattattagagcaaagttccaggaggccc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 412
Length of database: 813
Length adjustment: 9
Effective length of query: 403
Effective length of database: 804
Effective search space: 324012
Effective search space used: 324012
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
