Query= MSMg01no377_i15.b1 MSMg01no377_i15.b1 CHROMAT_FILE:
MSMg01no377_i15.b1 PHD_FILE: MSMg01no377_i15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:45 2005
(471 letters)
>mm_chr17_93621505_93622375
Length = 871
Score = 822 bits (425), Expect = 0.0
Identities = 457/471 (97%), Gaps = 7/471 (1%)
Strand = Plus / Minus
Query: 5 gaattcttacc----taccttaaatcagaagaattaaatggtttcatttctatattttcc 60
||||||||||| | |||||||||||||||||||||||||||||||||||||||||
Sbjct: 687 gaattcttaccaaaat---ttaaatcagaagaattaaatggtttcatttctatattttcc 631
Query: 61 agtttttgtaagtagggtttattgttgatggtaagaattgaaaccagtacactcctttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 630 agtttttgtaagtagggtttattgttgatggtaagaattgaaaccagtatactcctttaa 571
Query: 121 aatcaattgatcaagaccctttaactaaaaattacctatactttaataaactatatctat 180
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 570 aatcaattgatcaagaccctttaactaaaaattacctatactttaataaacgatatctat 511
Query: 181 aaaactaaaataacaatagctttatatataaatatgagtatcttgataatattcagtagt 240
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 aaaactaacataacaatagctttatatataaatatgagtatcttgataatattcagtagt 451
Query: 241 aggtttccactttttattaaagtactaaacatataaaagtatgtctttcatcagtacaaa 300
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 450 aggtttccactttttattaaagtactaaacatataaaagtatgtctttcatcagtataaa 391
Query: 301 attcaataaattttcaaaaactaaacttattcatgtaaaatcacccaataaaagcataat 360
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 390 attcaataaattttcaaaaactaaacttattcatgtaaaatcacccaatgaaagcataat 331
Query: 361 agtatcagcacattaggatacaatagcttttttaagtgaaatcaaattaatatccagcaa 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 agtaccagcacattaggatacaatagcttttttaagtgaaatcaaattaatatccagcaa 271
Query: 421 cagagaaaaggctaaaatgggataaacagcgaaatgcaagttatttaagta 471
||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 270 cagagaaaaggctaaaatgggataaacagtgaaatgcaagttatttaagta 220
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_i15.g1 MSMg01no377_i15.g1 CHROMAT_FILE:
MSMg01no377_i15.g1 PHD_FILE: MSMg01no377_i15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:45 2005
(468 letters)
>mm_chr17_93479850_93480718
Length = 869
Score = 855 bits (442), Expect = 0.0
Identities = 460/466 (98%), Gaps = 1/466 (0%)
Strand = Plus / Plus
Query: 1 tttg-aaaataatgtttttatttataactattccaacaaattgtggttctgtttgtgtga 59
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttgaaaaataatgtttttatttataactattccaacaaattgtggttctgtttgtgtga 260
Query: 60 acacaagcgattcttttcttagagaagtctagtagagtgccttatttatcatgcatttat 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 acacaagcgattcttttcttagagaagtctagtagagtgccttatttatcatgcatttat 320
Query: 120 aaatcccctattattacacgtatttcaatattaatactgatgccttcttctactttatcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatcccctattattacacgtatttcaatattaatactgatgccttcttctactttatcc 380
Query: 180 agttaatattttaacccaggatatacatattcttcatatttagaccacagtatttgagtt 239
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agttaatattttaatccaggatatacatattcttcatatttagaccacagtatttgagtt 440
Query: 240 aatggtttgttcatatctttgttcatttaactccaaaagagattatgggttttctacata 299
|||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 441 aatggtttgttcatatttttgttcatttaactccaaaagagattataggttttctacata 500
Query: 300 tcagacagaatcccacagtcctatggggaaaaaatacaagatgactcagaaacaaaatag 359
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcagaaagaatcccacagtcctatggggaaaaaatacaagatgactcagaaacaaaatag 560
Query: 360 agaataagtcattatgtcactaaccatgatgctatttctgacagcacatcgaagccttaa 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agaataagtcattatgtcactaaccatgatgctatttctgacagcacatcgaagccttaa 620
Query: 420 tatctttcattcttggggacacaatacatcaataaactatttctaa 465
||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tatcttttattcttggggacacaatacatcaataaactatttctaa 666
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 468
Length of database: 869
Length adjustment: 10
Effective length of query: 458
Effective length of database: 859
Effective search space: 393422
Effective search space used: 393422
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
