Query= MSMg01no377_j19.b1 MSMg01no377_j19.b1 CHROMAT_FILE:
MSMg01no377_j19.b1 PHD_FILE: MSMg01no377_j19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:51 2005
(451 letters)
>mm_chr17_29357343_29358194
Length = 852
Score = 862 bits (446), Expect = 0.0
Identities = 449/450 (99%), Gaps = 1/450 (0%)
Strand = Plus / Plus
Query: 1 tgacctcc-caaagacctgaggccctgagccaagctcaggggtgcccctgccctgccctg 59
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgacctccacaaagacctgaggccctgagccaagctcaggggtgcccctgccctgccctg 260
Query: 60 catgtgtgttttggggccggatgggaatgggggaagggaaccaaagaagcttagacgctt 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 catgtgtgttttggggccggatgggaatgggggaagggaaccaaagaagcttagacgctt 320
Query: 120 ggaggcccaggacctaatggagactattttcaattatagaatgtaattaacagtccgcca 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaggcccaggacctaatggagactattttcaattatagaatgtaattaacagtccgcca 380
Query: 180 aagcagtgcccctctgaagaggtcctcccagacctgctctaatgaatcaccgagccacga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aagcagtgcccctctgaagaggtcctcccagacctgctctaatgaatcaccgagccacga 440
Query: 240 gtgtattcctggtactcaaatctggaagctcggccgaaaggcctcagaagtaattagtcc 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgtattcctggtactcaaatctggaagctcggccgaaaggcctcagaagtaattagtcc 500
Query: 300 acttaagcaggctaaacgcttccctggcaatccggtttgcgcgtcgatggatttcaagtc 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acttaagcaggctaaacgcttccctggcaatccggtttgcgcgtcgatggatttcaagtc 560
Query: 360 tcagagagtgacgagtcacaggagccagcctccgtggagggagctccatctctcagactc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcagagagtgacgagtcacaggagccagcctccgtggagggagctccatctctcagactc 620
Query: 420 agtttacccaccctgccctttgcttctaag 449
||||||||||||||||||||||||||||||
Sbjct: 621 agtttacccaccctgccctttgcttctaag 650
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 451
Length of database: 852
Length adjustment: 10
Effective length of query: 441
Effective length of database: 842
Effective search space: 371322
Effective search space used: 371322
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no377_j19.g1 MSMg01no377_j19.g1 CHROMAT_FILE:
MSMg01no377_j19.g1 PHD_FILE: MSMg01no377_j19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:17:51 2005
(442 letters)
>mm_chr17_29541716_29542557
Length = 842
Score = 832 bits (430), Expect = 0.0
Identities = 439/442 (99%)
Strand = Plus / Minus
Query: 1 aaggttagcctaggctacatgagggcctgtacatggatgaacagatagattggccgatga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 aaggttagcctaggctacatgagggcctgtacatggatgaacagatagattggccgatga 583
Query: 61 atgatagatactcagagacagaggatgctatgtcaatggcagggagaagagagattaaag 120
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 atgatagatacttagagacagaggatgctatgtcaatggcagggagaagagagattaaag 523
Query: 121 gtgtttctggtcaaagcccctggagacctacgaaggggctcctgtttctaggctctcttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 gtgtttctggtcaaagcccctggagacctacgaaggggctcctgtttctaggctctcttc 463
Query: 181 acgtcctcccacttcttctggattcccgtgactctcatgctcgggaggagtcccacatga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 acgtcctcccacttcttctggattcccgtgactctcatgctcgggaggagtcccacatga 403
Query: 241 gtttgccatttgctacttctcagtgaaaaatatctcagacagagacagtgcgtccttagg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 gtttgccatttgctacttctcagtgaaaaatatctcagacagagacagtgcgtccttagg 343
Query: 301 cttttgaagccgtcctggtgcctacccagagagcttgtgagtggccaagcagctgaaggc 360
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 342 cttttgaagccgtcctggtgcctacccagagagcttgtgagtgaccaagcagctgaaggc 283
Query: 361 ttagggctcaaaatggagacacgggtccgcagaaggccacagggctggctttggttgtag 420
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 282 ttagagctcaaaatggagacacgggtccgcagaaggccacagggctggctttggttgtag 223
Query: 421 ctactatctagggggtcattgt 442
||||||||||||||||||||||
Sbjct: 222 ctactatctagggggtcattgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 442
Length of database: 842
Length adjustment: 9
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
