NNAATCTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXC
GCGGAATTCCTTTGATTCCTACTTCTTTAGAGATACCCAAATACAAAACA
CACCAACCAAATTGATCCTTGGACTAGTGAAGCATGCATACTTTGGAAAT
TGGGTTCAAAGGCATGCAGCACCCACCATTGCCTTTCTTGTCAGTGTTTA
ATTTTTAAGGTTACTATTTTCATAGACAGACTATTATTTTCATTTTTTTT
TAGTTATGAGCTTGTGTGTGTTTGTATAGGGTGGTAAGTATAGGTGCTAG
AGTCATGGGATCACCTGTGAACCTTGAGTCACTGGTTGCTTCTAGTTGCT
GAGGAAACAGTCAGTGCAAGCTGCTTACTGCTGAGCCCATCTTCCCAGCA
CACTGTTGATGTGTACCTTGTTTTATGTTTTATTGCAAAATCATCTGCAC
ACAATTTGTGTATGTTTTGTACTATCAAAAGATAAAAAACATACTTAACT
CATCTATTGCTCCTGATGAAAGTATAACTTAAAAACAAAATTCTAGGCCT
TTAGGCCCAGGCTTGGGAATGTGACCTCTGTGTCTTAATGCTCCAAGGTA
TGCTAATCATAAAACAGGTAGGGGCATTCCTCCACCCACCCGCTTTCTGG
GTTCAAAGAGTGTTCATTCAAAGAATGTGCTATTGTTAGGGGTTCTTAAA
AACTGTCTTGAAGAAAACCTGAACAATTACCAAGATTCCTTGTGATCTTG
TGACTTTTC

NAACGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCACCTGAGGAATACCGAAT
GACTGAAAAGCACCTAAAAAAATGTTCAACATCCTTAATCATAAGTGAAA
TGCAAATCAGAACAACCCTGAGATTCCACCTCACACCAGTCAGAAAGGCT
AAGATCAAAAATTCAGGTGACAGCAGATGCTGGCGAGGATGTGGAGAAAG
AGGAACACTCCTCCATGTTGGGGGTGGGGGGGATCTGCAAACTTATAGAT
AGAACAACATTATGAACTAACCAGTATTTCTGGAGCTCTTGATTCTAGCT
GCATATGTATTACAAGATGGCCTAGTTGGCCATCACTGGAAAGAGAGGCC
CATTGGTCTTGCAAACTTTATATGCCCCAGTACAGGTTAACGCCAGGGCC
AAAAAGTGGGAGTGGGTGGGTTGGGGAGTAGGTGCCTTCTTCCTACTTAC
CTTTTTTTTTTCTCCCCTCCTTTTCTTTTTTTTTCCTCTTTTTTTCTTCT
TCCCTTCTTTTTCCCTATTTTTACCACCCCCCTATTTTTTCCACCCCTTT
ATCATTATCCCCTATATTTTCTTCCCTCCTTTTTTTCTGATCTATATTCA
TTTTAACTTCATATTTCTTCCCATATATTTTTTTTTTTTTTTATTCCCTT
CTCCTTTATAATTAACATTTTCTACTCCCCTCTCTCTAGTCTTCTTCCCA
CATTATCTCTCCTCTTCATCTTCCTCCACCCCACTTACTATTTTATACCC
CCACCATAG

Query= MSMg01no378_f15.b1 MSMg01no378_f15.b1 CHROMAT_FILE:
MSMg01no378_f15.b1 PHD_FILE: MSMg01no378_f15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:18:49 2005
         (568 letters)



>mm_chr17_61741692_61742661
          Length = 970

 Score =  992 bits (513), Expect = 0.0
 Identities = 553/567 (97%), Gaps = 4/567 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcctttgattcc--tacttctttagagatacccaaatacaaaacacaccaaccaaa 62
           ||||||||||||  ||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 671 gaattcctttga-accaatacttctttagagatacccaaatacaaaacacaccaaccaaa 613

                                                                       
Query: 63  ttgatccttggactagtgaagcatgcatactttggaaattgggttcaaaggcatgcagca 122
           ||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct: 612 ttgatccttggactagtgaagcacgcatacttgggaaattgggttcaaaggcatgcagca 553

                                                                       
Query: 123 cccaccattgcctttcttgtcagtgtttaatttttaaggttactattttcatagacagac 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 cccaccattgcctttcttgtcagtgtttaatttttaaggttactattttcatagacagac 493

                                                                       
Query: 183 tattattttca-tttttttttagttatgagcttgtgtgtgtttgtatagggtggtaagta 241
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 492 tattattttcattttttttttagttatgagcttgtgtgtgtttgtatagggtggtaagtt 433

                                                                       
Query: 242 taggtgctagagtcatgggatcacctgtgaaccttgagtcactggttgcttctagttgct 301
           ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| ||||
Sbjct: 432 taggtgctagagtcatgggatcacccgtgaaccttgagtcactggttgctcctaggtgct 373

                                                                       
Query: 302 gaggaaacagtcagtgcaagctgcttactgctgagcccatcttcccagcacactgttgat 361
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 372 gaggaaacagtcagtgcaagctgcttactgctgagcccatctccccagcacactgttgat 313

                                                                       
Query: 362 gtgtaccttgttttatgttttattgcaaaatcatctgcacacaatttgtgtatgttttgt 421
           ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 gtgcaccttgttttatgttttattgcaaaatcatctgcacacaatttgtgtatgttttgt 253

                                                                       
Query: 422 actatcaaaagataaaaaacatacttaactcatctattgctcctgatgaaagtataactt 481
           ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 actatcaaaaggtaaaaaacatacttaactcatctattgctcctgatgaaagtataactt 193

                                                                       
Query: 482 aaaaacaaaattctaggcctttaggcccaggcttgggaatgtgacctctgtgtcttaatg 541
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 192 aaaaacaaaattctaggcctttaggcccaggcttgggaatgtgacctctgtgtcttaatg 133

                                      
Query: 542 ctccaaggtatgctaatcataaaacag 568
           |||||||||||||||||||||||||||
Sbjct: 132 ctccaaggtatgctaatcataaaacag 106


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 568
Length of database: 970
Length adjustment: 10
Effective length of query: 558
Effective length of database: 960
Effective search space:   535680
Effective search space used:   535680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)