XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTAA
GAGGAAAAAAATGATAACATATTCTTTGTGCATTTGGGGTCTGCTTGGAG
CAACTTTGAATCCCATTTAGTGGTACAAGAAGATCACCTGTTTCCAAATG
AGATCTGAATTCACCAGGTTTTTACACAATTCCATCTTTAAAACCTAGTA
TTTTTCATTAGAAATGATGGAGACTGGAATCAAGGACATTGTTTTAAAGT
GAATCCTCTGTCCTTCAGATAGGTTAACTTTGAAATAGGAACTTAATTGC
CAGTCTTTTGCTTTAAAGAACATTAATTGGATATATCTTATTGTGGCAAA
AAAATTATGTTTCAAAGGGAGATAACTAAAAAACACCAGACTTTTGTTTT
GACAGGTCATTTTTCTCAAAAGGCATACCCAGAAAATAAATTACTTGAGC
ATATACTTTAAAAAGAATAGAGAACTAATCTTAAAGAACCAGTTAGAATA
CTTCTTTCTTTCTTTCTTTCTTTCTTTTTTATATTCACAAAGGTTATGGA
CTAAATGAAAGTTTTCCAGTTTGACAGAGAATAATATTCTTACCTGTGGA
AGGGAAGCTCCCAGCCCTGTTTTTCTGTTTTGTAAGTGCCTACTACCACG
GAACAAAATATCTACCACATCCCTATTGGTTTGGAAACATTTCTTGGCCC
TGATGTGTAGNAATTACATTGTATTTTTGCAAAGTATGACCAAGGGAATT
GAGCGGGGGCAGAAAGAAAAAACCN

TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXGTCTCTGGTATCCTGAAATCCTGGTGTGCCA
ATCTCCTGAGATCCTGCTGTTTCAGAGCTCCTGGGAGTCAAACTTTCTCT
GGGTGTCATAGGAATGTATGGGAAGCCAGAGCCCTGGGTCTGCTCCTAAC
CCATGTTCAAACTGGAAGGAACCTTTGCCTCTGGTTGGGCCGGGGATTTG
TGATGCCCTGGTTCTTGTGGGGTCCCAGCTATGTTGTGTGCTAGGAAAGA
TGTTGTGGCCTCAACTATGATCTTGAGTGTGTCAGAGTTCCAGTGCTCCT
GGGTGTGTCCAATCTCCTGCGAGTAGAGCTTCCTCTGTGGTCCTGTGGTC
CTGTGATCCTGGGTGTATCAGAGCATTTATGATCCTGTGATTGTGGGAGT
TTCGGAGAACCTGGTAGTCAGGTTCCCTCTTGGTGTTGTAAGAGTGGGTG
CCGAACCAGCACCCCAGGTCTGCTTCATGTGTAGGTTCACACTGGAAGGA
ACCCATGCCACTCACTGGGCCGGAGTTCCTGAGTCCCTTGATCCTGTGGG
AACCCAATTACTCTGGGTGTTGGAGCAGATATTGTGGCGTCTTCTGTGAT
CCTGTGTGTGTTAAAGGAACTGGGAGTCAAGTTCCTCTGGGTGTTGTGGG
ACTGGGTGTGGAACCATTTCCCAAGGTCTGTTCTGGCTAGGGTTCAACTG
TATATAAAAAA

Query= MSMg01no383_l09.b1 MSMg01no383_l09.b1 CHROMAT_FILE:
MSMg01no383_l09.b1 PHD_FILE: MSMg01no383_l09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:25:49 2005
         (498 letters)



>mm_chr17_51446977_51447875
          Length = 899

 Score =  934 bits (483), Expect = 0.0
 Identities = 493/497 (99%), Gaps = 3/497 (0%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattctaagagg-aaaaaaatgataacatattctttgtgcatttggggtctgcttggag 63
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 gaattctaagaggaaaaaaaatgataacatattctttgtgcatttggggtctgcttggag 606

                                                                       
Query: 64  caactttgaatcccatttagtggtacaagaagatcacctgtttccaaatgagatctgaat 123
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 605 caactttgaatcccatttagtggtacaagaagatcacctgtttccaaatgagatctgaat 546

                                                                       
Query: 124 tcaccaggtttttacacaattccatctttaaaacctagtatttttcattagaaatgatgg 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tcaccaggtttttacacaattccatctttaaaacctagtatttttcattagaaatgatgg 486

                                                                       
Query: 184 agactggaatcaaggacattgttttaaagtgaatcctctgtccttcagataggttaactt 243
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 485 agactggaatcaaggacattgttttaaagtgaaccctctgtccttcagataggttaactt 426

                                                                       
Query: 244 tgaaataggaacttaattgccagtcttttgctttaaagaacattaattggatatatctta 303
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 tgaaataggaacttaattgccagtcttttgctttaaagaacattaattggatatatctta 366

                                                                       
Query: 304 ttgtggcaaaaaaattatgtttcaaagggagataactaaaaaacaccagacttttgtttt 363
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ttgtggcaaaaaaattatgtttcaaagggagataactaaaaaacaccagacttttgtttt 306

                                                                       
Query: 364 gacaggtcatttttctcaaaaggcatacccagaaaataaattacttgagcatatacttta 423
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 gacaggtcatttttctcaaaaggcatacccagaaaataaattacttgagcatatacttta 246

                                                                       
Query: 424 aaaagaatagagaactaatcttaaagaaccagttagaatacttctttctttctttctttc 483
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 aaaagaatagagaactaatcttaaagaaccagttagaatacttctttctttctttctttc 186

                            
Query: 484 tttctttttt--atatt 498
           ||||||||||  |||||
Sbjct: 185 tttcttttttttatatt 169


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 498
Length of database: 899
Length adjustment: 10
Effective length of query: 488
Effective length of database: 889
Effective search space:   433832
Effective search space used:   433832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)