Query= MSMg01no385_i10.b1 MSMg01no385_i10.b1 CHROMAT_FILE:
MSMg01no385_i10.b1 PHD_FILE: MSMg01no385_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:07 2005
(504 letters)
>mm_chr17_71370354_71371257
Length = 904
Score = 872 bits (451), Expect = 0.0
Identities = 487/499 (97%), Gaps = 2/499 (0%)
Strand = Plus / Plus
Query: 7 gaattctgtcccctgacccctcacggaaggagagaacgggtgctgagaagttgtcctctg 66
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctgtcccctgagccctcacggaaggagagaacgggtgctgagaagttgtcctctg 266
Query: 67 tgctccgtgtacatgctgtgacacacatgcaccccctagacgcacaaaatcaattacctg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 267 tgctccgtgtacatgctgtgacacacatgcaccccctagacgcacaaaatcaattacctg 326
Query: 127 atagatagatatgaaatgccagagccacaccgaggc-cagattctttatattcctatatg 185
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 327 atagatagatatgaaatgccagagccacaccgag-ctcagattctttatattcctatatg 385
Query: 186 gattctcccatatttctatatggaataaacactgttctgcctttttgtaatgtgtgcaca 245
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 386 gattctcccatatttctatatggaataaatactgttctgcctttttgtaatgtgtgcaca 445
Query: 246 atttgaaagaactcccaattatagaaattatcatactgtgaggttcagcttttctgtgcg 305
|||||||||||||||||||||||||| |||||| || |||||||||||||||||||||||
Sbjct: 446 atttgaaagaactcccaattatagaagttatcagaccgtgaggttcagcttttctgtgcg 505
Query: 306 cagtcactcacatccgtctcctgcctcctgggaaagggcggcaccatgaggtcttagctg 365
||||||||||||||||||||||||| |||||||||||| |||||| ||||||||||||||
Sbjct: 506 cagtcactcacatccgtctcctgccgcctgggaaagggtggcaccgtgaggtcttagctg 565
Query: 366 atctgaggcttgcacaaatcaggctggcctcaaattcacagagacccacctgtctctctc 425
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 atctgaggcttgcacaaaccaggctggcctcaaattcacagagacccacctgtctctctc 625
Query: 426 tgcctccagagcgctgggattgaaggtgtgcaccaccgcccagagagctttctgctttcc 485
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 626 tgcctccagagcactgggattgaaggtgtgcaccaccgcccagagagctttctgctttcc 685
Query: 486 agcttcacctatgtgcagt 504
|||||||||||||||||||
Sbjct: 686 agcttcacctatgtgcagt 704
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 504
Length of database: 904
Length adjustment: 10
Effective length of query: 494
Effective length of database: 894
Effective search space: 441636
Effective search space used: 441636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no385_i10.g1 MSMg01no385_i10.g1 CHROMAT_FILE:
MSMg01no385_i10.g1 PHD_FILE: MSMg01no385_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:07 2005
(474 letters)
>mm_chr17_71558261_71559134
Length = 874
Score = 901 bits (466), Expect = 0.0
Identities = 472/474 (99%)
Strand = Plus / Minus
Query: 1 caggatagccagggctacacagagaaaccctgttttgaaccccactccccacctccaaat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 713 caggatagccagggctacacagagaaaccctgttttgaaccccactccccacctccaaat 654
Query: 61 aaaacaaaaaacacaagtagacttagatatgttatgatcagaaacctatgtttaaagggt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 653 aaaacaaaaaacacaagtagacttagatatgttatgatcagaaacctatgtttaaagggt 594
Query: 121 caagttctaaactttctctccctcacactcccagccttaaaccttctacttacaatgtga 180
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 593 caagttctaaactttctctccctcacactcccagctttaaaccttctacttacaatgtga 534
Query: 181 taactatactactagtctattttggtagtgataataacttcaaggtctctaaaataaaca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 533 taactatactactagtctattttggtagtgataataacttcaaggtctctaaaataaaca 474
Query: 241 cagaagtctggtcctttggcttccacataaagtcatccagttttagtaagttgctataga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 cagaagtctggtcctttggcttccacataaagtcatccagttttagtaagttgctataga 414
Query: 301 aaccatgctttctacctcagggatgactattaaatatacgggcagtacaatgtacaatat 360
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 413 aaccatgctttctacctcagggatgactattaaatatacgggtagtacaatgtacaatat 354
Query: 361 acaatttcctttgaagcatccctccttactggaggttctttttacttatgcactgacttc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 acaatttcctttgaagcatccctccttactggaggttctttttacttatgcactgacttc 294
Query: 421 taagccaagaattaatatgtgctggagctgtgggttagcaggtaagactgtgga 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 taagccaagaattaatatgtgctggagctgtgggttagcaggtaagactgtgga 240
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 474
Length of database: 874
Length adjustment: 10
Effective length of query: 464
Effective length of database: 864
Effective search space: 400896
Effective search space used: 400896
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|