CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAATCCGCGG
AATTCAGCTACATTGCTCTAAAAAGGTGTCAGTCTCAGAATAGCAATCAT
GGTGATACACATTTTTAAGGAAGTCATAGCTTGTAAAAATTACTCATTGA
AAAGTCTTCCTTAAAATATCTGTTTCCATTCAGGATGCTCATTTCTTTTA
AATTGACATTCATTGTAGGAAATATTTGTATGTTTTAAAAATGAGTTTAA
AGACTTGCAACTTTGTGTCAAAGGCCATATTCTCATAGTAACTTTAGAAA
ATTTCCCTAATGATACTTCCTGTACAACCAAGAAATAAAACAAAACACAA
ACAAACAACAAGCCCCAAATGTTGCCCGACATTCGCAGGCCTTGCTCAGG
AAGAGGGCCACTCTTCTTTTGCTGCTTCAGGCTCTGCCTGTCAGAAGGGA
GGAATAATTATGGTTTTCTTTCTTTCTTTTTTTAGATTAATTTGTACATT
TATGTACATTAAAATGCTCAGTGTAATTTACTATATTTGCCTTATAAATT
TTGGCAGAATTCCATCCTTAATGAGTTTGTAGGTCAGTAATCCAAATAAA
CCTAATTTACTGAAAACAGTGAGCTAAGGGCCTCTATAGTTCATATTGAT
CTGGCTGTCTGAGGGGTTGGCTGGACATGGGGACCGTGTCTACTCTGCTC
TTCTCACTAATATCAGACTTGACGGTATGTGAGCAGAAGTCCACCAAGAA

CXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXAAGTCTTTGTCACTAAGCAGCTTATGGTCAC
TGAAGTGTGGAGCCTACTTAAGGGCCCAGGAATTGTGATTTAATATCCTC
CGGATTTACTGACAGGGTGATTTTTTGCTTTCCTCGTAGAATACCACTCC
GAATACCTGGGATTCATTATGTGGTTGCTTTGATGAAATGCTTAGACAGT
CAAACCTAATGACTCCCCTTTACCCTAAGACTTACTAAGCTTCCCCTGGA
CACTGCGCTCGCTCCCTCTGTGTACCTGGATGCACACATACACAAGCAGA
CGTAACAGTGAGGGAAGGCGACAGCTGGAGGGTCCTGTGCACAGCTGAGT
GTGCTGCATACTCACTCCATGAACCCAGCCTCCCGCCAAAGACCCATGAA
CACCCGCACTTTGATTTGTACTGATAGTTTTCTCAATTAAAAACAAACTT
GTGATATCAATACACCATTATTCAGCTGGCCCTCTAGATTTGAAACGGAA
TTTTTCTTATTATCATCCTTTCTCACTCCCTCAATATATTTCCAAAGCAC
AGGAATGAGCTGATTTTTAAAATAATAGTTCCTGCCACATGTTTCACTAA
AATCAGGAATAAGACTAGGGTTCCTGCTCTCACCCTAGCTATTCAATAAA
GTAGTCAAAGATTTAGCCCGCGCATTTAGGCAAGAAAGGAGATT

Query= MSMg01no386_b14.b1 MSMg01no386_b14.b1 CHROMAT_FILE:
MSMg01no386_b14.b1 PHD_FILE: MSMg01no386_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:28:50 2005
         (706 letters)



>mm_chr17_5075771_5076876
          Length = 1106

 Score = 1288 bits (666), Expect = 0.0
 Identities = 693/702 (98%), Gaps = 2/702 (0%)
 Strand = Plus / Plus

                                                                       
Query: 6   gaattcagctacattgctctaaaaaggtgtcagtctcagaatagcaatcatggtgataca 65
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 gaattcagctacattgttctaaaaaggtgtcagtctcagaatagcaatcatggtgataca 265

                                                                       
Query: 66  catttttaaggaagtcatagcttgtaaaaattactcattgaaaagtcttccttaaaatat 125
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 catttttaaggaagtcatagcttgtaaaaattactcattgaaaagtcttccttaaaatat 325

                                                                       
Query: 126 ctgtttccattcaggatgctcatttcttttaaattgacattcattgtaggaaatatttgt 185
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 ctgtttccattcaggatgctcatttcttttaaattgacattcattgtaggaaatatttgt 385

                                                                       
Query: 186 atgttttaaaaatgagtttaaagacttgcaactttgtgtcaaaggccatattctcatagt 245
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 atgttttaaaaatgagtttaaagacttgcaactttgtgtcaaaggccatattctcatagt 445

                                                                       
Query: 246 aactttagaaaatttccctaatgatacttcctgtacaaccaagaaataaaacaaaacaca 305
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 aactttagaaaatttccttaatgatacttcctgtacaaccaagaaataaaacaaaacaca 505

                                                                       
Query: 306 aacaaacaacaagccccaaatgttgcccgacattcgcaggccttgctcaggaagagggcc 365
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 aacaaacaacaagccccaaatgttgcccgacattcgcaggccttgctcaggaagagggcc 565

                                                                       
Query: 366 actcttcttttgctgcttcaggctctgcctgtcagaagggaggaataattatggttttct 425
           |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 566 actcttcttttgttgcttcaggctctgcctgtcagaagggaggaataattatggtttttt 625

                                                                       
Query: 426 tt-ctttctttttttagattaatttgtacatttatgtacattaaaatgctcagtgtaatt 484
           || ||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 626 tttctttctttttt-agattaatttgtacatttatgtacattaaagtgctcagtgtaatt 684

                                                                       
Query: 485 tactatatttgccttataaattttggcagaattccatccttaatgagtttgtaggtcagt 544
           ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tactatatttgccttataaatattggcagaattccatccttaatgagtttgtaggtcagt 744

                                                                       
Query: 545 aatccaaataaacctaatttactgaaaacagtgagctaagggcctctatagttcatattg 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 aatccaaataaacctaatttactgaaaacagtgagctaagggcctctatagttcatattg 804

                                                                       
Query: 605 atctggctgtctgaggggttggctggacatggggaccgtgtctactctgctcttctcact 664
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 805 atctggctgtctgaggggttggctggacatggggaccgtgtctactctgcttttctcact 864

                                                     
Query: 665 aatatcagacttgacggtatgtgagcagaagtccaccaagaa 706
           ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 865 aatatcagacttgacggtatgtgagcagaagtccaccaagaa 906


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 706
Length of database: 1106
Length adjustment: 10
Effective length of query: 696
Effective length of database: 1096
Effective search space:   762816
Effective search space used:   762816
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)