Query= MSMg01no389_i21.b1 MSMg01no389_i21.b1 CHROMAT_FILE:
MSMg01no389_i21.b1 PHD_FILE: MSMg01no389_i21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:12 2005
(431 letters)
>mm_chr17_85224351_85225182
Length = 832
Score = 812 bits (420), Expect = 0.0
Identities = 429/432 (99%), Gaps = 1/432 (0%)
Strand = Plus / Plus
Query: 1 aactccccactgcctcatgtactgtagagatgcgctctgaaggcaagggaaagggccagt 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 201 aactccccactgcctcatgtactgtagagatgtgctctgaaggcaagggaaagggccagt 260
Query: 61 gtttcctgaacttccctgtgaacaagaaccccataagacacacactaatgtgtgccacct 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 atttcctgaacttccctgtgaacaagaaccccataagacacacactaatgtgtgccacct 320
Query: 121 aagagttccctagggagtgagaaacttggtgtaattctcatggtctgcaagaggggcttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aagagttccctagggagtgagaaacttggtgtaattctcatggtctgcaagaggggcttt 380
Query: 181 cactgggatgtagac-gaccagaccatgttactaaaggctaaacgctgatgctgctccag 239
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cactgggatgtagacagaccagaccatgttactaaaggctaaacgctgatgctgctccag 440
Query: 240 gagcctagcaacctgagtttgtccataactcctgcagccgtagaactcagcctaaactta 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gagcctagcaacctgagtttgtccataactcctgcagccgtagaactcagcctaaactta 500
Query: 300 gttagcggctctgtctctccctaagcctccctgtcccctctgcagtatttttccatcatt 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gttagcggctctgtctctccctaagcctccctgtcccctctgcagtatttttccatcatt 560
Query: 360 gtcttgtgtaacatttgcttctctgtcaatggagttaggaattttgtttttattcgctgc 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 gtcttgtgtaacatttgcttctctgtcaatggagttaggaattttgtttttattcgctgc 620
Query: 420 tcgtaccaccac 431
||||||||||||
Sbjct: 621 tcgtaccaccac 632
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 431
Length of database: 832
Length adjustment: 9
Effective length of query: 422
Effective length of database: 823
Effective search space: 347306
Effective search space used: 347306
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no389_i21.g1 MSMg01no389_i21.g1 CHROMAT_FILE:
MSMg01no389_i21.g1 PHD_FILE: MSMg01no389_i21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:12 2005
(317 letters)
>mm_chr17_85433183_85433899
Length = 717
Score = 592 bits (306), Expect = e-173
Identities = 315/318 (99%), Gaps = 1/318 (0%)
Strand = Plus / Minus
Query: 1 gaggagggaggctccagtggggcaagagtctacaataaacgacttggaagaagcaggaaa 60
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 413 gaggagggaggctccagtggggcgagagtctacaataaacgacttggaagaagcaggaaa 354
Query: 61 gatacagacctgagcaggaggattggaagaagcaggagagaaacacacaatcaggcagga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 gatacagacctgagcaggaggattggaagaagcaggagagaaacacacaatcaggcagga 294
Query: 121 ggactgctcccgagacagggcagccttgcctgctgaactggagtgtctagtgagtctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 ggactgctcccgagacagggcagccttgcctgctgaactggagtgtctagtgagtctggg 234
Query: 181 tttcagggccagcgcatggcatcttgctagcaccgtccttcagcatccctgcgggggttg 240
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 233 tttcagggccagcgcatggcatcttgctagcaccgtccttcagcatcgctgcgggggttg 174
Query: 241 gtgggaccctggcgg-cgtcaaatcagcaggtgctcaagagtcttgtatagaaatggagt 299
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 173 gtgggaccctggcggacgtcaaatcagcaggtgctcaagagtcttgtatagaaatggagt 114
Query: 300 gtttgcgtatagctctca 317
||||||||||||||||||
Sbjct: 113 gtttgcgtatagctctca 96
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 717
Length adjustment: 9
Effective length of query: 308
Effective length of database: 708
Effective search space: 218064
Effective search space used: 218064
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
