Query= MSMg01no390_c12.b1 MSMg01no390_c12.b1 CHROMAT_FILE:
MSMg01no390_c12.b1 PHD_FILE: MSMg01no390_c12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:59 2005
(244 letters)
>mm_chr17_67056763_67057406
Length = 644
Score = 451 bits (233), Expect = e-131
Identities = 239/241 (99%)
Strand = Plus / Plus
Query: 1 ttactgccttatttgttctataaacaggggaactcgagatactgttgtcttgccccttgg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttactgccttatttgttctataaacaggggaactcgagatactgttgtcttgccccttgg 260
Query: 61 ttatagaaagatcatcagactgttcactgcatatttctgcttctctggtctgagcctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttatagaaagatcatcagactgttcactgcatatttctgcttctctggtctgagcctccc 320
Query: 121 aggaggccctggcttactcggcttactcgtgtatttacttggccagataaccctaattct 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 aggaggccctggcttactcggcttactcgtgtatttacttggccagataaccctaagcct 380
Query: 181 taggagaaaagccgggtcaggggcttagaagattagataagcagaggtggtaagcggaga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 taggagaaaagccgggtcaggggcttagaagattagataagcagaggtggtaagcggaga 440
Query: 241 a 241
|
Sbjct: 441 a 441
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no390_c12.g1 MSMg01no390_c12.g1 CHROMAT_FILE:
MSMg01no390_c12.g1 PHD_FILE: MSMg01no390_c12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:33:59 2005
(532 letters)
>mm_chr17_67254864_67255797
Length = 934
Score = 932 bits (482), Expect = 0.0
Identities = 521/534 (97%), Gaps = 2/534 (0%)
Strand = Plus / Minus
Query: 1 tcatattctttgtcagaggccaccacgtttatttcattatctgcatttggtctctatggg 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 734 tcatattctttgtcagaggccaccatgtttatttcattatctgcatttggtctctatggg 675
Query: 61 accttgtgatgtgtaactaagtagccatcacttggtctgaagccttgtcccttctctccc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 674 accttgtgatgtgtaactaagtagccatcacttggtctgaagccttgtcccttctctccc 615
Query: 121 tctccgtcactccacgctgtcacacttacctttcacccatgatc-tttgtgggtatccat 179
||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 614 tctccgtcactccacgctgtcacacttgcctttcacccatgatcttttgtgggtatccat 555
Query: 180 ttcttaccagctttcattactactgcaaaatacctgagacaatcgactaataaagaagaa 239
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 554 ttctcaccagctttcattactactgcaaaatacctgagacaatcgactaataaagaagaa 495
Query: 240 aggttgcttgtttcatggtttcagaatat-taagcacttggtcatgttgtgttgcacctg 298
|||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 494 aggttgcttggctcatggtttcagaatatataagcacttggtcatgttgtgttgcacctg 435
Query: 299 tggtactgaactacttcatgatgggaacataggctacagggagtctgttcgcctctacag 358
|||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 434 tggtactgaactactttatgatgggaacataggctgcagggagtctgttcgcctctacag 375
Query: 359 ggagtctgttcgcctcaccatggtcaaagagcaagagaggaaaagggatgagaggcccag 418
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 ggagtctgttcgcctcaccatggtcaaagagcaagagaggaaaagggatgagaggcccag 315
Query: 419 cagtcccctatggggcacgccttgagataaagtcttacctttagctgtgggcaggtatat 478
|||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||||
Sbjct: 314 cagtcccctatgggacacaccttgagataaagccttacctttagctgtgggcaggtatat 255
Query: 479 ttagtcataaaagtttggcctgtatactcacaagcacctgtaccaaagaaattg 532
|||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 254 ttagtcataaaagtttggtctgtatactcacaagcacctgtaccaaagaaattg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 532
Length of database: 934
Length adjustment: 10
Effective length of query: 522
Effective length of database: 924
Effective search space: 482328
Effective search space used: 482328
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
