Query= MSMg01no394_g09.b1 MSMg01no394_g09.b1 CHROMAT_FILE:
MSMg01no394_g09.b1 PHD_FILE: MSMg01no394_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:46 2005
(464 letters)
>mm_chr17_28123858_28124720
Length = 863
Score = 864 bits (447), Expect = 0.0
Identities = 453/455 (99%), Gaps = 1/455 (0%)
Strand = Plus / Plus
Query: 10 ctggtctacatagctagttccaggctagcagggccacacagtaagaccctgtctttgtgt 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 210 ctggtctacatagctagttccaggctagcagggccacacagtaagaccctgtctttgtgt 269
Query: 70 gtgtgtgtatgtgtgcagcgtgtgtacacccaatgtgtttatgtgcatgcatgcaggaac 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtgtgtgtatgtgtgcagcgtgtgtacacccaatgtgtttatgtgcatgcatgcaggaac 329
Query: 130 ctgtggaggtcagacgagagtgttgggttctacagatggttctgagctgttatgtggatg 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 ctgtggaggtcagacgagagtgttgggttctacagatggttctgagctgttatgtggatg 389
Query: 190 cagggaatgagcataggtcctttacaagaacagtgagagcctgtaacctctgagcacttc 249
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 cagggaatgagcgtaggtcctttacaagaacagtgagagcctgtaacctctgagcacttc 449
Query: 250 tccagccccatgtctgctttatgttggtctctacttctgtagagatgtatagttggcaga 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 tccagccccatgtctgctttatgttggtctctacttctgtagagatgtatagttggcaga 509
Query: 310 tcatctcaaggtgtgttttgttttgcttcctgtccaacacacaaggtgttggcagcggcc 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 tcatctcaaggtgtgttttgttttgcttcctgtccaacacacaaggtgttggcagcggcc 569
Query: 370 gtggtgaaccgccagggtgaagaggtcatcactggcagagtccttcccattctctgagaa 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 gtggtgaaccgccagggtgaagaggtcatcactggcagagtccttcccattctctgagaa 629
Query: 430 gccagtgtgtgaatgacaaaagtagctcataatgg 464
|||||||||||||||||||| ||||||||||||||
Sbjct: 630 gccagtgtgtgaatgacaaa-gtagctcataatgg 663
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 464
Length of database: 863
Length adjustment: 10
Effective length of query: 454
Effective length of database: 853
Effective search space: 387262
Effective search space used: 387262
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no394_g09.g1 MSMg01no394_g09.g1 CHROMAT_FILE:
MSMg01no394_g09.g1 PHD_FILE: MSMg01no394_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 23:39:46 2005
(449 letters)
>mm_chr17_28284990_28285837
Length = 848
Score = 822 bits (425), Expect = 0.0
Identities = 443/449 (98%), Gaps = 1/449 (0%)
Strand = Plus / Minus
Query: 1 ctcgaggccacggcttctggatctttgaacccacaataactgccagcagagccgtgcaca 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 648 ctcgaggccatggcttctggatctttgaacccacaataactgccagcagagccgtgcaca 589
Query: 61 cttgagcacttagcaaaaagccactagggacctgcacaagggcaagcactgtgccggggc 120
||||||||||||||||| ||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 588 cttgagcacttagcaaacagccactagggacctgcacaagggcaagcactgtgccagggc 529
Query: 121 tgtgggctcccttgtgagtgggacagagtaaccatgtaatgaaggagctctgagggcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 528 tgtgggctcccttgtgagtgggacagagtaaccatgtaatgaaggagctctgagggcatc 469
Query: 181 tgttaaacagatggcagctacctgcgggatacaccagagaagaagcctgcctctctactc 240
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 468 tgttaaacagatggcagctacctgcgggatacaccagagaagaagcctgcctctttactc 409
Query: 241 tcctttgaccatttggcattctgggaacaggggtgtcctagggagtttattctgaggagc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 tcctttgaccatttggcattctgggaacaggggtgtcctagggagtttattctgaggagc 349
Query: 301 agaaagctcactgggtaaagcacctcatgtgaccgtgagggcccccagctggaattccca 360
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 348 agaaagctcactgggtaaagcacctcatgtgaccgtgaaggcccccagctggaattccca 289
Query: 361 gaactcatgtaaggctagattcagtctgagtgctcctacagcaaaaaacgggaggcagag 420
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 288 gaactcatgtaaggctagattcagtctgagtgctcctacagc-aaaaacgggaggcagag 230
Query: 421 acaggagagtccccagattgcaagccagc 449
|||||||||||||||||||||||||||||
Sbjct: 229 acaggagagtccccagattgcaagccagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 449
Length of database: 848
Length adjustment: 10
Effective length of query: 439
Effective length of database: 838
Effective search space: 367882
Effective search space used: 367882
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
