Query= MSMg01no395_o20.b1 MSMg01no395_o20.b1 CHROMAT_FILE:
MSMg01no395_o20.b1 PHD_FILE: MSMg01no395_o20.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:55 2005
(435 letters)
>mm_chr17_37271428_37272262
Length = 835
Score = 801 bits (414), Expect = 0.0
Identities = 426/430 (99%)
Strand = Plus / Plus
Query: 6 ggaattcctgggtttgtcctcagcatttcccccaaggactcactcaggaagggcataatt 65
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcctgggtttgtactcagcatttcccccaaggactcactcaggaagggcataatt 265
Query: 66 aatttgggtggtacatatccatcagagtcatgaaaggtcagatgactatgagagctaaga 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 aatttgggtggtacatatccatcagagtcatgaaaggtcagatgactatgagagctaaga 325
Query: 126 ggaagaacatcaatttgcattttgtgtcccaattgaacctcgggacatctctggctgtcc 185
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 326 ggaagaacatcaatttgcattttgtgtcccaattgaacctcaggacatctctggctgtcc 385
Query: 186 tggaattcactttgtagagcaggctggctcaaagaccaacctgccttagctttctaagta 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tggaattcactttgtagagcaggctggctcaaagaccaacctgccttagctttctaagta 445
Query: 246 ttgggaataaaattgtgggccattaccacctgtcccagaagaatcatttatctttgtgta 305
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 446 ttgggaataaaattgtgggccattaccacctgtcccagaagaatcatttatttttgtgta 505
Query: 306 ctctgaaaatattggtatactgaataatacatcttctctatttgttgcccctgttgacaa 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 ctctgaaaatattggtatactgaataatacatcttctctatttgttgcccctgttgacaa 565
Query: 366 gagtttgggtcatgtgtgtggtaagttaactaaaaaacttactgtttaattcatagtggg 425
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gagtttggatcatgtgtgtggtaagttaactaaaaaacttactgtttaattcatagtggg 625
Query: 426 gaatatagtt 435
||||||||||
Sbjct: 626 gaatatagtt 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 435
Length of database: 835
Length adjustment: 9
Effective length of query: 426
Effective length of database: 826
Effective search space: 351876
Effective search space used: 351876
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no395_o20.g1 MSMg01no395_o20.g1 CHROMAT_FILE:
MSMg01no395_o20.g1 PHD_FILE: MSMg01no395_o20.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:07:55 2005
(507 letters)
>mm_chr17_37386977_37387890
Length = 914
Score = 582 bits (301), Expect = e-170
Identities = 458/515 (88%), Gaps = 17/515 (3%)
Strand = Plus / Minus
Query: 1 tcagcacagtcaccacaagctgagcataggagatcagtaccag-ccaaatg-ggaca-gt 57
|||||||| ||||||||| |||||||||||| ||||| | ||| ||| | | | ||| ||
Sbjct: 596 tcagcacaatcaccacaaactgagcataggacatcagaatcagcccaga-gagaacaggt 538
Query: 58 caggaagataacagagagaacaaatgtagtcatctgggccactcaggtatc-gaagcaag 116
| ||||| |||| ||||||||||||||| ||||||||||||||||||||| | ||||||
Sbjct: 537 -aagaagacaacaaagagaacaaatgtagacatctgggccactcaggtatctg-agcaag 480
Query: 117 c------catcaaaggtgagaaatcacagtaaaagtgatcaattaggttggggccacaga 170
| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 479 ccaggatcatcaaaggtgagaaatcacagtaaaagtgatcaattaggttggggccacaga 420
Query: 171 acctcagctgggctgtcagagcaaccactaatccatcttccataaagccagacagccaga 230
|||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||
Sbjct: 419 acctcagctgggctgtcaaagcaaccactaatccagcttccataaagccagacagccaga 360
Query: 231 ctgtgagcaccaaccccaggtaccattgaggcctcatgagacgtgggtattatagggagt 290
|| | ||||||||||||| | |||||||||||||||||||||||||||||||||||||||
Sbjct: 359 ctataagcaccaaccccaagcaccattgaggcctcatgagacgtgggtattatagggagt 300
Query: 291 aacagattgctaggcagtgatcatatgccatgacagccaggaggaaatactcatct--at 348
|| ||||||||||||||||||||| |||||||| || ||| ||||||||||||||| ||
Sbjct: 299 aaaagattgctaggcagtgatcatgtgccatgagagtcagcaggaaatactcatctgcat 240
Query: 349 ataaagagagctaaaggtgaagaactggagcaagcagccaggcaatgtaaccagactttt 408
|| ||||| | ||||||| |||||||||||||||||||| || |||| ||||||||||
Sbjct: 239 cta--gagaggtgaaggtgaggaactggagcaagcagccagccagtgtagccagactttt 182
Query: 409 ggctactttatgggttcctttttctactgcctttctatactctcatgccttctaaccctg 468
|||||||||||||||| |||||||||||||||||||| || || | | ||||||| ||||
Sbjct: 181 ggctactttatgggtttctttttctactgcctttctacacccttaagacttctaatcctg 122
Query: 469 taacactagataggacagaaagaaagatagagggg 503
|| ||||||||| | |||||||||||||||||||
Sbjct: 121 aaatactagatagaagagaaagaaagatagagggg 87
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 914
Length adjustment: 10
Effective length of query: 497
Effective length of database: 904
Effective search space: 449288
Effective search space used: 449288
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
