Query= MSMg01no398_c13.b1 MSMg01no398_c13.b1 CHROMAT_FILE:
MSMg01no398_c13.b1 PHD_FILE: MSMg01no398_c13.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:49 2005
(660 letters)
>mm_chr17_51119382_51120441
Length = 1060
Score = 1268 bits (656), Expect = 0.0
Identities = 656/656 (100%)
Strand = Plus / Minus
Query: 5 gaattcagactattacattaatctgtttagctgtagtaccagctgcttgtgtgattttaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 860 gaattcagactattacattaatctgtttagctgtagtaccagctgcttgtgtgattttaa 801
Query: 65 ttatctgattagatgatataagtgacctatgaaataaatagaaggtgaacatttaaaaac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 800 ttatctgattagatgatataagtgacctatgaaataaatagaaggtgaacatttaaaaac 741
Query: 125 tactactatgtctctacatatcttctttaagaaataaaatgatgattttccacaaaagtt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 tactactatgtctctacatatcttctttaagaaataaaatgatgattttccacaaaagtt 681
Query: 185 caaaggatctcatgtatatacatatattttatttagttaatgtaggactttacttagact 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 caaaggatctcatgtatatacatatattttatttagttaatgtaggactttacttagact 621
Query: 245 tttaagttataattccaacatagaaaattatcctcaattatctgtaaagcataggttggg 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 tttaagttataattccaacatagaaaattatcctcaattatctgtaaagcataggttggg 561
Query: 305 tttacttagccagaaatctgtggtaaatttggcttactagccaatttgtttaaagataac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 tttacttagccagaaatctgtggtaaatttggcttactagccaatttgtttaaagataac 501
Query: 365 tcaaaacagttagtattcacttggaaactgaaaatatttcaaagttttcattcatcatct 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tcaaaacagttagtattcacttggaaactgaaaatatttcaaagttttcattcatcatct 441
Query: 425 tgtattttataagtggcataggatagaatgttgtcattgtaatttgttttaaaatgaaca 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 440 tgtattttataagtggcataggatagaatgttgtcattgtaatttgttttaaaatgaaca 381
Query: 485 tgtacattatctttgattctaatttttcatagttcatgtatacagtggtaaatcatcaaa 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 380 tgtacattatctttgattctaatttttcatagttcatgtatacagtggtaaatcatcaaa 321
Query: 545 tttattatttttttctatttaatcccatctgaccccaattttgaatgtggtttcttaagc 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 320 tttattatttttttctatttaatcccatctgaccccaattttgaatgtggtttcttaagc 261
Query: 605 tgtgccattcaggaaagtgtactactggtattttttctggattttgacaactgaat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 260 tgtgccattcaggaaagtgtactactggtattttttctggattttgacaactgaat 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no398_c13.g1 MSMg01no398_c13.g1 CHROMAT_FILE:
MSMg01no398_c13.g1 PHD_FILE: MSMg01no398_c13.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:10:49 2005
(470 letters)
>mm_chr17_50930217_50931088
Length = 872
Score = 820 bits (424), Expect = 0.0
Identities = 462/478 (96%), Gaps = 8/478 (1%)
Strand = Plus / Plus
Query: 1 accactattgcagatgcataaggagacagactcctctggagctcctgaccc-agggagtt 59
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 201 accactattgcagatgcataaggagacagactcctctggagctcctgaccccagggagtt 260
Query: 60 ctcccactgagacctgtgccagactctgacctatacaatcactagacagtacagagggat 119
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 261 ctcccactgagacctgtgccagactctgacctatacaatcaccagacagtacagagggat 320
Query: 120 tctaaaatcactagatctgttaattctttgtcacctgaagaaaactttgtccaaagttcc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaaatcactagatctgttaattctttgtcacctgaagaaaactttgtccaaagttcc 380
Query: 180 aacttataaagttacctgttataactaaacaaacaatccaactcaccttctgtatctttt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacttataaagttacctgttataactaaacaaacaatccaactcaccttctgtatctttt 440
Query: 240 cttttcttt-ctttcttttttt------ttttttttttttcgagacagggtttctctgtg 292
||||||||| |||||||||||| |||||||||||| |||| ||| ||||||||||
Sbjct: 441 cttttcttttctttctttttttcttttttttttttttttttgagataggatttctctgtg 500
Query: 293 tagccttggctgtcctggaactcactctgtagactaagctggcctcgaactcaaaaatcc 352
||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 501 tagccctggctgtcctggaactcactctgtagactaagctggcctcgaactcagaaatcc 560
Query: 353 gcctgcctctgcctcctaagtgctgggattaaaggtgtgcgctaccaccgcccagctacc 412
|||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 561 gcctgcctctgcctcccaagtgctgggattaaaggtgtgcgataccaccgcccagctacc 620
Query: 413 ttctgtacctttagttctacaattgttattttgtatattctaggattttcttttactc 470
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ttctgtacctttagttctacaattgttattttgtatattctaggattttcttttactc 678
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 470
Length of database: 872
Length adjustment: 10
Effective length of query: 460
Effective length of database: 862
Effective search space: 396520
Effective search space used: 396520
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
