Query= MSMg01no400_d23.b1 MSMg01no400_d23.b1 CHROMAT_FILE:
MSMg01no400_d23.b1 PHD_FILE: MSMg01no400_d23.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:29 2005
(482 letters)
>mm_chr17_75869511_75870392
Length = 882
Score = 886 bits (458), Expect = 0.0
Identities = 473/478 (98%), Gaps = 2/478 (0%)
Strand = Plus / Plus
Query: 6 ggaattcactggcattacgcactctctctcactgccacaatttcaagtaggggtgtgggc 65
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 206 ggaattcactggcactaggcactctctctcactgccacaatttcaagtaggggtgtgggc 265
Query: 66 atcattcccattgtttacagagaggagactgagaataagaaaatgtacgtaacttgtcca 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 atcattcccattgtttacagagaggagactgagaataagaaaatgtacgtaacttgtcca 325
Query: 126 cagtcatggaggaagtacgtgcaggcagaattctacacagtgtaaacaatctattagccc 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 cagtcatggaggaagtacgtgcaggcagaattctacacagtgtaaacaatctattagccc 385
Query: 186 cgaatcccaggaatttctctgtttatgctgtcatccaggggaagacggggttcaattaca 245
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 386 cgaatcccaggaatttctctgtttatgctgtcatccaggcgaagacggggttcaattaca 445
Query: 246 tcattcaagtgcacattttgaattgtcttttgtagtgaaaaaggctgtaccttgtcatga 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcattcaagtgcacattttgaattgtcttttgtagtgaaaaaggctgtaccttgtcatga 505
Query: 306 tcttctgttaggcattggtttatgactagtttgtggtgtgctggctgatgggtattgttg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 tcttctgttaggcattggtttatgactagtttgtggtgtgctggctgatgggtattgttg 565
Query: 366 gtggtattaagtaagttttatgggcagttgacttgaagaataagtccatcttagtcacag 425
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 566 gtggtattaagtaagttttatgggcagttgacttgaagaataagtccatcttagtcacag 625
Query: 426 acacaaagatattggcttcagataacatttgtagtggaatttca-tcatcattttcgt 482
|||||||||||||||||||||||||||||||||||||||||| | |||||||||||||
Sbjct: 626 acacaaagatattggcttcagataacatttgtagtggaattt-agtcatcattttcgt 682
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space: 411584
Effective search space used: 411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no400_d23.g1 MSMg01no400_d23.g1 CHROMAT_FILE:
MSMg01no400_d23.g1 PHD_FILE: MSMg01no400_d23.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:13:29 2005
(419 letters)
>mm_chr17_76020794_76021612
Length = 819
Score = 547 bits (283), Expect = e-160
Identities = 310/319 (97%)
Strand = Plus / Minus
Query: 101 tgaagaattcactcttttctctttttaagaagacattttggttggaaatgctttctcttt 160
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 819 tgaagaattcactcttttctctttttaagaagacattttggttggaaatgctttctcttt 760
Query: 161 tttcccatgtttttatttcttgacgctttcatgtatgaatacaatgtattgttttcatac 220
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 759 tttcccatgtttttatttcttgacgctttcatgtatgaatacaatgtattgttttcgtac 700
Query: 221 acactcctattgccctctcttatttccttcttaatcctgattacttccaactagccttcc 280
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 699 acactcctattgccctctcttatttccatcttaatcctgattacttccaactagccttcc 640
Query: 281 tcctgctttcatgtttttgaggatggagtgaagtggggacagggggtgtcttgtgccatg 340
||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 639 tcctgctttaatgtttttggggatggagtggggtggggacagggggtgtcttgtgccatg 580
Query: 341 agccagagctgccacctgctcctgattccaacaatcctgtcattagcacacctcaccagc 400
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 579 agccagagctgccacctgctcctgattccaacagtcctgtcattagcacacctcaccagc 520
Query: 401 ccctgactttttcataatg 419
|||||||| || |||||||
Sbjct: 519 ccctgactcttccataatg 501
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 419
Length of database: 819
Length adjustment: 9
Effective length of query: 410
Effective length of database: 810
Effective search space: 332100
Effective search space used: 332100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
