TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATGGGGTCTTACGAGTGCACCTATTACTATTTTTCCCTAACTGGA
CATGATGCCAAACTCTCCTCTAAATTTGTATATCTATACTTATAGGTTAG
TGCAGTTCTCAGGTCTCATCAGAGAAGTTTCCTTATGTACTGAAGGGCAG
TTGACACAGACATTTATAGCAAGCTTTAATCGCAGAGAAGTGACAACCCC
AAATTAAACATCTATATCATACCTCCTCCCCAAAGCTCAGGGATTTCTTC
ATTCATGAACTCACATCATTTGTGTTTACCTGCATAAGATCAAACCAGTT
TACATTCTAGCATGGAGGAAGCAAGAAGGGACTCTGACTGAGGAGTTATG
AAGAGCTGATGGTTGTTGGCAGAAACTTGTTTTTGTTTGTTTTGCTTTGC
TTTGTTTTGTTTTGTTTTGTTTGGGACATAGCTTCTGTTAGTTCAACCAA
ATTCCCAGTTATCCCATACCCAGAATATTGGCTAGCAGNTATTGGAATTG
GTGGCTTATTATTATTATTATTATTATTATTATTATTATTATTAGNAANN
AGTAAAGGGCTTGGAGTTGTGGGNATAGGNNAGTTTTTTNNNTTTTTNNT
TTTTNNTTTTTTTTTTTTTTTTATTTATTAATAGTAATATTAATTTTTTT
ATCTTTTTTTTTTTTTTTTTTTTTTGAATAGGCATTTTTTTTTTTTACTT
TCTTTCCTCTCCCTTTTTTCC

CGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXAAACTCTATTTTCTAAGTTACCTTGTTCA
CAGTGTTGTATGACAGCAGTAGAAAAATAAGTGAGCTACTAGCTTTATCT
ACATAATGATAATCTACATATCTACAAAATTTAGCCTTCGAGTGGGTATT
GTTGCAAAAATAAAAGAACTAATCACAAGAAAGACAGATGTCTAAGACAC
TCTTTTCTTGGTCCACATGCAAGGCAGAGTTCTTGGATCAATTTTACATC
AGACTTTCAGTCATTAATGTATTTCCAAGTACACCATGCAGAAATTCCCT
AGTTAGAGGCGTGCTCCAGGAAGACCATTTCCTAGGAGACTAATGCTGAA
GACTCAGGCAAAAACACCGGAGCAAAGATTGCCCTCATATGATGAGTGGG
ATATACATCTTTCATATAGACAAATGTATTTGTAAAAAAAATAGCTGCAT
GTGTATAATAAATACCAACTGGATGGCTTTTTATTTTAAATTCATCTTGA
CTTTTTTTCTAGACAAAAAGATTGATATCATTGATATTGGATAATGCCTC
ACTTTTATCTGCTCAATGTGNTTGAGCTANGGAGAATCACCAGAATTACC
TCGGAGAACTTACATAATGGCTTAAAGGGCCCCTGAAGCCACATGAAAAA
ATTCTCGGCAAAAGGGTTATGGGGGGCATTAAAACAAAAGGTTTTTGACC
CTTTTATAAACTTAATATGGGCCCCTCA

Query= MSMg01no401_i21.g1 MSMg01no401_i21.g1 CHROMAT_FILE:
MSMg01no401_i21.g1 PHD_FILE: MSMg01no401_i21.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:15:12 2005
         (485 letters)



>mm_chr17_62726444_62727327
          Length = 884

 Score =  849 bits (439), Expect = 0.0
 Identities = 474/489 (96%), Gaps = 9/489 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   aaactctattttctaagttaccttgttcacagtgttgtatgacagcagtagaaaaataag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaactctattttctaagttaccttgttcacagtgttgtatgacagcagtagaaaaataag 260

                                                                       
Query: 61  tgagctactagctttatctacataatgataatctacatatctacaaaatttagccttcga 120
           |||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 261 tgagctcctagctttatctacataatgataatctacatgtctacaaaatttagccttcga 320

                                                                       
Query: 121 gtgggtattgttgcaaaaataaaagaactaatcacaagaaagacagatgtctaagacact 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gtgggtattgttgcaaaaataaaagaactaatcacaagaaagacagatgtctaagacact 380

                                                                       
Query: 181 cttttcttggtccacatgcaaggcagagttcttggatcaattttacatcagactttcagt 240
               ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ----tcttggtccacatgcaaggcagagttcttggatcaattttacatcagactttcagt 436

                                                                       
Query: 241 cattaatgtatttccaagtacaccatgcagaaattccctagttagaggcgtgctccagga 300
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 437 cattaatgtatttccaagtacaccatgcagaaattccctagttagaggcgtgcttcagga 496

                                                                       
Query: 301 agaccatttcctaggagactaatgctgaagactcaggcaaaaacaccggagcaaagattg 360
           || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 497 agcccatttcctaggagactcatgctgaagactcaggcaaaaacaccggagcaaagattg 556

                                                                       
Query: 361 ccctcatatgatgagt-gggatatacatctttcatatagacaaatgtatttgtaaaaaaa 419
           |||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 557 ccctcatatgatgagtaggg-tatacatctttcacatagacaaatgtatttgtaaaaaaa 615

                                                                       
Query: 420 a---tagctgcatgtgtataataaataccaactggatggctttttattttaaattcatct 476
           |   ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 616 aaaatagctgcatgtgtataataaataccaactggatggctttttattttaaattcatct 675

                    
Query: 477 tgacttttt 485
           |||||||||
Sbjct: 676 tgacttttt 684


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 485
Length of database: 884
Length adjustment: 10
Effective length of query: 475
Effective length of database: 874
Effective search space:   415150
Effective search space used:   415150
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)