Query= MSMg01no403_b22.b1 MSMg01no403_b22.b1 CHROMAT_FILE:
MSMg01no403_b22.b1 PHD_FILE: MSMg01no403_b22.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:17 2005
(487 letters)
>mm_chr17_8676427_8677313
Length = 887
Score = 907 bits (469), Expect = 0.0
Identities = 478/481 (99%)
Strand = Plus / Minus
Query: 7 gaattctctttcatccccactgcccaacatcccttcccagccctgcagtttggcacactt 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 550 gaattctctttcatccccactgcccaacatcccttcccagccctgcagtttggcacactt 491
Query: 67 gtaatgtttgtccaggactgttatttagtaggggatctggaaccaaaggaaactcttggg 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 gtaatgtttgtccaggactgttatttagtaggggatctggaaccaaaggaaactcttggg 431
Query: 127 tattttggcagccactgatgcataagtaccaatggtaactggcacaggtggctatcgctg 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 tattttggcagccactgatgcataagtaccaatggtaactggcacaggtggctatcgctg 371
Query: 187 taaacatgcctcacccagcacagtgattcacaggacagactgccagttgagcaaggctac 246
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 370 taaacatgcctcacccagcacagtgattcacaggacagactgccagttgagcgaggctac 311
Query: 247 aggtctatttcttaactaaacactgaactctgtaggaaggtgtactgtccacttgtttag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 aggtctatttcttaactaaacactgaactctgtaggaaggtgtactgtccacttgtttag 251
Query: 307 cttcttttacatcccatgcatttaaaaccaattgtcagacactactgggcaaggtggcac 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 cttcttttacatcccatgcatttaaaaccaattgtcagacactactgggcaaggtggcac 191
Query: 367 aagccattaattccagtattccagagacagaagcaagcaaatctctataggtttgaagcc 426
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 190 aagccattgattccagtattccagagacagaagcaagcaaatctctataggtttgaagcc 131
Query: 427 agcctatagagactgaggctagtctacatgtaaagttccgaactagctaaaccacacagc 486
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 130 agcctatagagactgaggctagtctacatgtaaagttccaaactagctaaaccacacagc 71
Query: 487 a 487
|
Sbjct: 70 a 70
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 487
Length of database: 887
Length adjustment: 10
Effective length of query: 477
Effective length of database: 877
Effective search space: 418329
Effective search space used: 418329
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no403_b22.g1 MSMg01no403_b22.g1 CHROMAT_FILE:
MSMg01no403_b22.g1 PHD_FILE: MSMg01no403_b22.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:17:17 2005
(471 letters)
>mm_chr17_8496461_8497331
Length = 871
Score = 903 bits (467), Expect = 0.0
Identities = 470/471 (99%)
Strand = Plus / Plus
Query: 1 cagggactcctcagaggatataaatgccagagccccgaggcgctaggggcgagctcagaa 60
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 cagggactcctcagaggatataaatgccagagccccgaggcgctaggggtgagctcagaa 260
Query: 61 gcagctgctgctccccctgttcctgctgttgttgctgtttgtcaaagggccatgagcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcagctgctgctccccctgttcctgctgttgttgctgtttgtcaaagggccatgagcaaa 320
Query: 121 gaatgtgggcaagtagactgtgccaccagacagaagaactggtatggctgaaacaggttc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gaatgtgggcaagtagactgtgccaccagacagaagaactggtatggctgaaacaggttc 380
Query: 181 aaaaatcctggtaagtctcagagttgagaaaggtaggcattggaaccggctcctggccag 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aaaaatcctggtaagtctcagagttgagaaaggtaggcattggaaccggctcctggccag 440
Query: 241 gctctacctatcctggaacatgtaaccaggacaccccactgagaggaccatgacaaccag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gctctacctatcctggaacatgtaaccaggacaccccactgagaggaccatgacaaccag 500
Query: 301 tcatgtagcataaaaacctagcgttctccgtgctaatgagggatctagataagccccaag 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tcatgtagcataaaaacctagcgttctccgtgctaatgagggatctagataagccccaag 560
Query: 361 tgtttaggcaatgagcttctcttcctgtgcattcctgcccacagaaggtatttaatctct 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tgtttaggcaatgagcttctcttcctgtgcattcctgcccacagaaggtatttaatctct 620
Query: 421 ggttcacctggagtaagatatacattcatatcccccataaaaataaagccg 471
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ggttcacctggagtaagatatacattcatatcccccataaaaataaagccg 671
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 471
Length of database: 871
Length adjustment: 10
Effective length of query: 461
Effective length of database: 861
Effective search space: 396921
Effective search space used: 396921
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
