Query= MSMg01no405_m24.b1 MSMg01no405_m24.b1 CHROMAT_FILE:
MSMg01no405_m24.b1 PHD_FILE: MSMg01no405_m24.b1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:54 2005
(454 letters)
>mm_chr17_21922443_21923296
Length = 854
Score = 855 bits (442), Expect = 0.0
Identities = 448/450 (99%)
Strand = Plus / Plus
Query: 5 gaattctgcattccttactctttgttttagaaaaggtgcagccctgcacctaggccttag 64
|||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctgcattccatattctttgttttagaaaaggtgcagccctgcacctaggccttag 264
Query: 65 catctgaactgagcattttagaaaagagtcaattaattaggaccccaactgcaggcaggg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 catctgaactgagcattttagaaaagagtcaattaattaggaccccaactgcaggcaggg 324
Query: 125 ttgatctagagtctgtatttcaacagggtagaatttggaagcacagttttgctcatcata 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttgatctagagtctgtatttcaacagggtagaatttggaagcacagttttgctcatcata 384
Query: 185 acttctccatctgagaggagacactgtgatcctgtttgatatcaatgcagcctttataga 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 acttctccatctgagaggagacactgtgatcctgtttgatatcaatgcagcctttataga 444
Query: 245 acgactgctctacaaccagacctcaaatgtgtattttatattccgtacaagcttgctgat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 acgactgctctacaaccagacctcaaatgtgtattttatattccgtacaagcttgctgat 504
Query: 305 gtgagaccatcatcacaatcatcctattttcacagagataggaaatacaagatagagcat 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtgagaccatcatcacaatcatcctattttcacagagataggaaatacaagatagagcat 564
Query: 365 gactgttccagaaagtattattttgacttatttatttgatttttaaaaaagatttatttt 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gactgttccagaaagtattattttgacttatttatttgatttttaaaaaagatttatttt 624
Query: 425 atgtatgtaagtacactattgcgctcttca 454
||||||||||||||||||||||||||||||
Sbjct: 625 atgtatgtaagtacactattgcgctcttca 654
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 454
Length of database: 854
Length adjustment: 10
Effective length of query: 444
Effective length of database: 844
Effective search space: 374736
Effective search space used: 374736
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no405_m24.g1 MSMg01no405_m24.g1 CHROMAT_FILE:
MSMg01no405_m24.g1 PHD_FILE: MSMg01no405_m24.g1.phd.1 CHEM: term DYE:
big TIME: Wed May 18 18:20:54 2005
(382 letters)
>mm_chr17_22071748_22072528
Length = 781
Score = 700 bits (362), Expect = 0.0
Identities = 377/382 (98%), Gaps = 1/382 (0%)
Strand = Plus / Minus
Query: 1 attgctgagtctgtccagtcctcagacactgttcgtggaaactctgtatcagcacttgct 60
|||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||
Sbjct: 462 attgctgagtctgtccagtcctcagacattgttcgtggaaactctgtgtcagcacttgct 403
Query: 61 cattgcctggcatggttttatgacataaaacattgatattcacttggctctagaaaaatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 402 cattgcctggcatggttttatgacataaaacattgatattcacttggctctag-aaaatc 344
Query: 121 atctttttccttttcaattctctttaattttatatgagtccatagcatgtcatccatctg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 atcattttccttttcaattctctttaattttatatgagtccatagcatgtcatccatctg 284
Query: 181 ctatttcctattgacacactgaactacttggacagtggcattagaaagagatcttccaag 240
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 283 ctatttcctattgacacactgaactacttggacagtggcattagaaagagaccttccaag 224
Query: 241 tgtccgttaaatatctggacaaatgtagccaccaatggccacaggctactgggttcctga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 223 tgtccgttaaatatctggacaaatgtagccaccaatggccacaggctactgggttcctga 164
Query: 301 aaggtaagctagggatggatgggaaggatggcgagagaaataacgagccaagacaaagtt 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 163 aaggtaagctagggatggatgggaaggatggcgagagaaataacgagccaagacaaagtt 104
Query: 361 ctctgatcaaggcttgatgttt 382
||||||||||||||||||||||
Sbjct: 103 ctctgatcaaggcttgatgttt 82
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 382
Length of database: 781
Length adjustment: 9
Effective length of query: 373
Effective length of database: 772
Effective search space: 287956
Effective search space used: 287956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
